RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 DENND2DQ9H6A0 471 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 C8orf33Q9H7E9 229 aaPredicted RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 POPDC3Q9HBV1 291 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 IARS2Q9NSE4 1012 aaKnown RBP6.81□□□□□ -1.32
CNOT1-222ENST00000570139 ASIC5Q9NY37 505 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 IL36AQ9UHA7 158 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 CHKBQ9Y259 395 aa6.81□□□□□ -1.32
CNOT1-222ENST00000570139 SCN8AQ9UQD0 1980 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 LOC102723996A0A087X1L8 192 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TMEM120BA0PK00 339 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 FAM157AC9JC47 383 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 H7C1Q1 480 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 K7ERQ8 282 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 PSMD11O00231 422 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 COPEO14579 308 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TYROBPO43914 113 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 RNASEH1O60930 286 aaKnown RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 GLRA3O75311 464 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 IL7RP16871 459 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 EDN2P20800 178 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 CRABP2P29373 138 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TLX1P31314 330 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 IDUAP35475 653 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 MAGEA12P43365 314 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 CENPAP49450 140 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 STK19P49842 368 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 CCR3P51677 355 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 STC1P52823 247 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 SLC12A2P55011 1212 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 ADARP55265 1226 aaKnown RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 IL9RQ01113 521 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 SCN1BQ07699 218 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 ELP6Q0PNE2 266 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 ITGA9Q13797 1035 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 IHHQ14623 411 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 ICAM4Q14773 271 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TYSND1Q2T9J0 566 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 CCDC153Q494R4 210 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 GPR33Q49SQ1 333 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 FASTKD1Q53R41 847 aaKnown RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TAF1BQ53T94 588 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 IGSF11Q5DX21 431 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 C6orf141Q5SZD1 244 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 FAM46CQ5VWP2 391 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TMEM215Q68D42 235 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 ZNF470Q6ECI4 717 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TRAT1Q6PIZ9 186 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 PARM1Q6UWI2 310 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 NAPRTQ6XQN6 538 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 GLRX5Q86SX6 157 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 PEG10Q86TG7 708 aaKnown RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 RALGPS2Q86X27 583 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 MCEMP1Q8IX19 187 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 MMP21Q8N119 569 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TMEM217Q8N7C4 229 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 BANPQ8N9N5 519 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 OR2A12Q8NGT7 310 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 OR4L1Q8NH43 312 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 RAB3IL1Q8TBN0 382 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 WIPF2Q8TF74 440 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 PIH1D2Q8WWB5 315 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 FGF14Q92915 247 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 RAB7BQ96AH8 199 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 PTERQ96BW5 349 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 VPS39Q96JC1 886 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 ZFYVE19Q96K21 471 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TSNARE1Q96NA8 513 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 WWC2-AS2Q96NR7 200 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 PLEKHG4BQ96PX9 1271 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 KXD1Q9BQD3 176 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TMEM245Q9H330 911 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 ZDHHC6Q9H6R6 413 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 UBE2ZQ9H832 354 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 BPIFA1Q9NP55 256 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 MBNL1Q9NR56 388 aaKnown RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 INTS9Q9NV88 658 aaKnown RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 LRIT1Q9P2V4 623 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 THAP10Q9P2Z0 257 aaPredicted RBP6.8□□□□□ -1.32
CNOT1-222ENST00000570139 DCDC2Q9UHG0 476 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 BPTFQ12830 3046 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 DOCK8Q8NF50 2099 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 TICRRQ7Z2Z1 1910 aa6.8□□□□□ -1.32
CNOT1-222ENST00000570139 CEP290O15078 2479 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 DOCK6Q96HP0 2047 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 A0A087X1B8 175 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 C1orf232A0A0U1RR37 186 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 LINC00473A8K010 186 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 H3BMM5 538 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 MBTPS2O43462 519 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 GOSR1O95249 250 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 PIGNO95427 931 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 UGT2B4P06133 528 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 CD9P21926 228 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 SPAM1P38567 509 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 OPRD1P41143 372 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 SLC1A2P43004 574 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 SOX2P48431 317 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 CLDN2P57739 230 aa6.79□□□□□ -1.32
CNOT1-222ENST00000570139 DCDC1P59894 354 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms