RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SNX11Q9Y5W9 270 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 A6NCN8 305 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SHISA7A6NL88 538 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 ADAMDEC1O15204 470 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 RPS6KA3P51812 740 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SRP54P61011 504 aaKnown RBP17.2■□□□□ 0.34
SMPD3-211ENST00000568373 YPEL5P62699 121 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 IL1RL1Q01638 556 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 ROR2Q01974 943 aaKnown RBP17.2■□□□□ 0.34
SMPD3-211ENST00000568373 REEP3Q6NUK4 255 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 TNFAIP8L2Q6P589 184 aaPredicted RBP17.2■□□□□ 0.34
SMPD3-211ENST00000568373 C6orf120Q7Z4R8 191 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 ATG16L2Q8NAA4 619 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 OR8K5Q8NH50 307 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 HMGB4Q8WW32 186 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 GEMIN6Q8WXD5 167 aaKnown RBP17.2■□□□□ 0.34
SMPD3-211ENST00000568373 POLR1BQ9H9Y6 1135 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 A4GALTQ9NPC4 353 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 B4GALT2O60909 372 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SEMA4FO95754 770 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 GLULP15104 373 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SLC5A2P31639 672 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SLC19A1P41440 591 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 OR1E2P47887 323 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SLAMF1Q13291 335 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 RAPSNQ13702 412 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 KEAP1Q14145 624 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 ALG11Q2TAA5 492 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 TOR1AIP1Q5JTV8 583 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 ACOT4Q8N9L9 421 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SETD9Q8NE22 299 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 FBLIM1Q8WUP2 373 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 FAM3CQ92520 227 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 ZNF300Q96RE9 604 aaPredicted RBP17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SRMSQ9H3Y6 488 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SYNPO2LQ9H987 977 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 SLC35C2Q9NQQ7 365 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 KRT84Q9NSB2 600 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 BLOC1S6Q9UL45 172 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 RAB23Q9ULC3 237 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 ASB4Q9Y574 426 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 LYVE1Q9Y5Y7 322 aa17.2■□□□□ 0.34
SMPD3-211ENST00000568373 PRAMEF25A6NGN4 478 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 BTN3A3O00478 584 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 MAN2B1O00754 1011 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 CYP4B1P13584 511 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 F3P13726 295 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 ITGA2P17301 1181 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 ATP5A1P25705 553 aaKnown RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 TTKP33981 857 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 PMS2P3Q13401 168 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 BROXQ5VW32 411 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 MRM1Q6IN84 353 aaKnown RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 LAIR2Q6ISS4 152 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 PAQR7Q86WK9 346 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 ARMC8Q8IUR7 673 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 SRFBP1Q8NEF9 429 aaKnown RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 SLC38A5Q8WUX1 472 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 AMDHD1Q96NU7 426 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 TRNAU1APQ9NX07 287 aaKnown RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 EBF1Q9UH73 591 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 TESMINQ9Y4I5 508 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 ARHGEF17Q96PE2 2063 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 C10orf142B7Z368 130 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 TNFRSF11BO00300 401 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 GUCY1B2O75343 617 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 CPNE6O95741 557 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 CD72P21854 359 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 TSFMP43897 325 aaKnown RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 CCT3P49368 545 aaKnown RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 CLK3P49761 638 aaKnown RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 GABARAPL2P60520 117 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 TOP3AQ13472 1001 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 SIM2Q14190 667 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 SKIV2LQ15477 1246 aaKnown RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 TJAP1Q5JTD0 557 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 Q6ZSR6 202 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 TTC29Q8NA56 475 aaPredicted RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 SMYD1Q8NB12 490 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 SLC22A18Q96BI1 424 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 MPP4Q96JB8 637 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 GLIPR2Q9H4G4 154 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 USP36Q9P275 1121 aaKnown RBP17.19■□□□□ 0.34
SMPD3-211ENST00000568373 PCDHGA2Q9Y5H1 932 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 HS3ST3A1Q9Y663 406 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 FANCMQ8IYD8 2048 aa17.19■□□□□ 0.34
SMPD3-211ENST00000568373 TRBV23OR9-2A0A075B6M9 112 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 C5orf58C9J3I9 102 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 NARSO43776 548 aaKnown RBP17.18■□□□□ 0.34
SMPD3-211ENST00000568373 SH3BP5O60239 455 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 PRAMEF10O60809 474 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 ABCB7O75027 752 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 PRKRAO75569 313 aaKnown RBP17.18■□□□□ 0.34
SMPD3-211ENST00000568373 BCHEP06276 602 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 ASGR2P07307 311 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 AGXTP21549 392 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 STXBP1P61764 594 aaKnown RBP17.18■□□□□ 0.34
SMPD3-211ENST00000568373 IL5RAQ01344 420 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 TP53BP2Q13625 1128 aa17.18■□□□□ 0.34
SMPD3-211ENST00000568373 RAB39AQ14964 217 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms