RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CD200R1Q8TD46 325 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CANT1Q8WVQ1 401 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 LRTOMTQ8WZ04 291 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 STARD8Q92502 1023 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 FGF14Q92915 247 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 EXT2Q93063 718 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SLCO4A1Q96BD0 722 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ZNF707Q96C28 371 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ULK4Q96C45 1275 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 PPP1R14BQ96C90 147 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 NRBF2Q96F24 287 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ZNF764Q96H86 408 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 METTL2AQ96IZ6 378 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ZC3H10Q96K80 434 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 NSMCE2Q96MF7 247 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 LYSMD1Q96S90 227 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 HERC2P3Q9BVR0 1158 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 UGT2B28Q9BY64 529 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SLC29A3Q9BZD2 475 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 GPR63Q9BZJ6 419 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 UNKQ9C0B0 810 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CLPBQ9H078 707 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 RBM38Q9H0Z9 239 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 PCDHAC1Q9H158 963 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 P2RY12Q9H244 342 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TUBB1Q9H4B7 451 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SLC32A1Q9H598 525 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MAGIXQ9H6Y5 334 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 NOL11Q9H8H0 719 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 GORASP2Q9H8Y8 452 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SARS2Q9NP81 518 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SEMA4BQ9NPR2 832 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 DDX18Q9NVP1 670 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MRPS18AQ9NVS2 196 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SMPD3Q9NY59 655 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 UBAP1Q9NZ09 502 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CD274Q9NZQ7 290 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 IL17CQ9P0M4 197 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TMEM9Q9P0T7 183 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 LSM7Q9UK45 103 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 BLOC1S6Q9UL45 172 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 AURKCQ9UQB9 309 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MED16Q9Y2X0 877 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TMED5Q9Y3A6 229 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 OARD1Q9Y530 152 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 DMXL2Q8TDJ6 3036 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 F5P12259 2224 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TRIP11Q15643 1979 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CCDC160A6NGH7 325 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 OR51F1A6NGY5 319 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 C16orf96A6NNT2 1141 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 F8W810 466 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 H3BML4 177 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 KPNA5O15131 536 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ARPC2O15144 300 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 INPP4BO15327 924 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SLC16A5O15375 505 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 TEX28O15482 410 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 FFAR2O15552 330 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SYNCRIPO60506 623 aaKnown RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 NOL3O60936 208 aaKnown RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 TRMUO75648 421 aaKnown RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SCELO95171 688 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 PGM3O95394 542 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 OLFM2O95897 454 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 IGSF6O95976 241 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 KRT6AP02538 564 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 KRT6BP04259 564 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 C8GP07360 202 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 LINC00032P0C843 101 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 EBLN1P0CF75 366 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CDH1P12830 882 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CDH2P19022 906 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ATP6V1B2P21281 511 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 PRPH2P23942 346 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SERPINA4P29622 427 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 HMOX2P30519 316 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SPAM1P38567 509 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CAPGP40121 348 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 NSG1P42857 185 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 GNPDA1P46926 289 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 KRT6CP48668 564 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 GSK3BP49841 420 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 HNMTP50135 292 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SOX8P57073 446 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CDKL1Q00532 357 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 LIPEQ05469 1076 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 CHRNB3Q05901 458 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 BCL2L1Q07817 233 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ABRQ12979 859 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 IL18R1Q13478 541 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 GTF2H2Q13888 395 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 GTF2H3Q13889 308 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 IHHQ14623 411 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SF3A2Q15428 464 aaKnown RBP5.07□□□□□ -1.6
CAPN3-217ENST00000567817 RFX4Q33E94 735 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 SLC36A3Q495N2 470 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ZBED5Q49AG3 693 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 GGTA1PQ4G0N0 100 aa5.07□□□□□ -1.6
CAPN3-217ENST00000567817 ZRANB3Q5FWF4 1079 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms