RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 NCF1BA6NI72 391 aaPredicted RBP14.28□□□□□ -0.12
PALB2-205ENST00000567003 NCF1CA8MVU1 366 aaPredicted RBP14.28□□□□□ -0.12
PALB2-205ENST00000567003 PRAMEF4O60810 478 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 CTNSO60931 367 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 FAM155BO75949 473 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 NCF1P14598 390 aaPredicted RBP14.28□□□□□ -0.12
PALB2-205ENST00000567003 ZNF37AP17032 561 aaPredicted RBP14.28□□□□□ -0.12
PALB2-205ENST00000567003 BMP5P22003 454 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 CDC25BP30305 580 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 TRPC1P48995 793 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 LTBQ06643 244 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 ASPHQ12797 758 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 STX4Q12846 297 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 HYAL4Q2M3T9 481 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 BBS9Q3SYG4 887 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 PRAMEF9Q5VWM5 478 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 ULK2Q8IYT8 1036 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 TNIP2Q8NFZ5 429 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 OR2L5Q8NG80 312 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 RUNDC3BQ96NL0 473 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 F2RL3Q96RI0 385 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 SERINC2Q96SA4 455 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 SH3GL2Q99962 352 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 MAPKAP1Q9BPZ7 522 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 REXO4Q9GZR2 422 aaKnown RBP14.28□□□□□ -0.12
PALB2-205ENST00000567003 ZNF703Q9H7S9 590 aaPredicted RBP14.28□□□□□ -0.12
PALB2-205ENST00000567003 COPS7BQ9H9Q2 264 aaPredicted RBP14.28□□□□□ -0.12
PALB2-205ENST00000567003 VTI1BQ9UEU0 232 aa14.28□□□□□ -0.12
PALB2-205ENST00000567003 LRRC3CA6NJW4 275 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 HRKO00198 91 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 HCN1O60741 890 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 H2AFYO75367 372 aaKnown RBP14.27□□□□□ -0.13
PALB2-205ENST00000567003 TACR1P25103 407 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 SLC6A12P48065 614 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 MTTPP55157 894 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 TSNQ15631 228 aaKnown RBP14.27□□□□□ -0.13
PALB2-205ENST00000567003 CYP1B1Q16678 543 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 TRIM40Q6P9F5 258 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 ABHD17CQ6PCB6 329 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 OPN5Q6U736 354 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 ZNF793Q6ZN11 406 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 GALNT7Q86SF2 657 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 RASGEF1CQ8N431 466 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 TRIM58Q8NG06 486 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 ZNF721Q8TF20 911 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 ANKRD49Q8WVL7 239 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 KIAA1191Q96A73 305 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 PDLIM5Q96HC4 596 aaKnown RBP14.27□□□□□ -0.13
PALB2-205ENST00000567003 SGCZQ96LD1 299 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 WDR83Q9BRX9 315 aaKnown RBP14.27□□□□□ -0.13
PALB2-205ENST00000567003 B4GALT7Q9UBV7 327 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 OARD1Q9Y530 152 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 PSAT1Q9Y617 370 aa14.27□□□□□ -0.13
PALB2-205ENST00000567003 A0A088AWK7 358 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 RTCAO00442 366 aaKnown RBP14.26□□□□□ -0.13
PALB2-205ENST00000567003 SYT5O00445 386 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 SH3BGRLO75368 114 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 CLEC3AO75596 197 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 ATE1O95260 518 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 TTC4O95801 387 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 FOSL1P15407 271 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 GNAZP19086 355 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 ZNF10P21506 573 aaPredicted RBP14.26□□□□□ -0.13
PALB2-205ENST00000567003 ASCL1P50553 236 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 ZNF791Q3KP31 576 aaPredicted RBP14.26□□□□□ -0.13
PALB2-205ENST00000567003 ADPRMQ3LIE5 342 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 PIGGQ5H8A4 983 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 LYPD8Q6UX82 237 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 DGAT2L6Q6ZPD8 337 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 FRA10AC1Q70Z53 315 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 UBE3DQ7Z6J8 389 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 OR4N5Q8IXE1 308 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 C9orf40Q8IXQ3 194 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 TTLQ8NG68 377 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 OR8K3Q8NH51 312 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 GABPB2Q8TAK5 448 aaPredicted RBP14.26□□□□□ -0.13
PALB2-205ENST00000567003 FAM222BQ8WU58 562 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 ESAMQ96AP7 390 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 ANKRD9Q96BM1 317 aaPredicted RBP14.26□□□□□ -0.13
PALB2-205ENST00000567003 RHBDF1Q96CC6 855 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 MBD6Q96DN6 1003 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 JSRP1Q96MG2 331 aaPredicted RBP14.26□□□□□ -0.13
PALB2-205ENST00000567003 TMEM79Q9BSE2 394 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 PROK2Q9HC23 129 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 SH2D2AQ9NP31 389 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 PRDM7Q9NQW5 492 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 ZNF490Q9ULM2 529 aaPredicted RBP14.26□□□□□ -0.13
PALB2-205ENST00000567003 CHMP2BQ9UQN3 213 aa14.26□□□□□ -0.13
PALB2-205ENST00000567003 MED12Q93074 2177 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 ANKDD1BA6NHY2 528 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 HSPB2A8KAH6 182 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 RAF1P04049 648 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 GABRA1P14867 456 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 CD22P20273 847 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 KCNJ2P63252 427 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 PPP1R7Q15435 360 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 HSPB2Q16082 182 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 DEFB113Q30KQ7 82 aa14.25□□□□□ -0.13
PALB2-205ENST00000567003 ACSF3Q4G176 576 aaPredicted RBP14.25□□□□□ -0.13
PALB2-205ENST00000567003 FBXW10Q5XX13 1052 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms