RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 OVCA2Q8WZ82 227 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 GPR62Q9BZJ7 368 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 ATP13A2Q9NQ11 1180 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 SAGE1Q9NXZ1 904 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 PITPNM1O00562 1244 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 SHOXO15266 292 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 TIA1P31483 386 aaKnown RBP eCLIP14.96□□□□□ -0.01
COMMD4-215ENST00000566843 CASP9P55211 416 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 C1DQ13901 141 aaKnown RBP14.96□□□□□ -0.01
COMMD4-215ENST00000566843 SPIN4Q56A73 249 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 LAMTOR1Q6IAA8 161 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 ANGPTL8Q6UXH0 198 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 THOC6Q86W42 341 aaKnown RBP14.96□□□□□ -0.01
COMMD4-215ENST00000566843 KLHDC8AQ8IYD2 350 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 CITED4Q96RK1 184 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 NELL2Q99435 816 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 TSSK6Q9BXA6 273 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 PRRG3Q9BZD7 231 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 RBFOX1Q9NWB1 397 aaKnown RBP14.96□□□□□ -0.01
COMMD4-215ENST00000566843 NDRG2Q9UN36 371 aaKnown RBP14.96□□□□□ -0.01
COMMD4-215ENST00000566843 MGAT4BQ9UQ53 548 aa14.96□□□□□ -0.01
COMMD4-215ENST00000566843 ZSCAN5BA6NJL1 495 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 E7EQ34 232 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 FFAR1O14842 300 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 SMAD6O43541 496 aaKnown RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 ADAMTS4O75173 837 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 IFNW1P05000 195 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 ZNF8P17098 575 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 ATP13A5Q4VNC0 1218 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 TRIM40Q6P9F5 258 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 PAQR6Q6TCH4 344 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 CRTC1Q6UUV9 634 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 DPY19L3Q6ZPD9 716 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 SPERTQ8NA61 448 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 SKA2Q8WVK7 121 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 APOBEC4Q8WW27 367 aaKnown RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 MARVELD3Q96A59 401 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 REEP4Q9H6H4 257 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 PPP1R3EQ9H7J1 279 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 MBD1Q9UIS9 605 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 STOML2Q9UJZ1 356 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 TMPRSS11EQ9UL52 423 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 DIMT1Q9UNQ2 313 aaKnown RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 CASP8AP2Q9UKL3 1982 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 TRBV4-1A0A0J9YWV2 114 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 HEPACAM2A8MVW5 462 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 STK25O00506 426 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 TBL1XO60907 577 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 OR2B3O76000 313 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 AP2A2O94973 939 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 C6orf47O95873 294 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 INHAP05111 366 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 SRPRAP08240 638 aaKnown RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 ACADMP11310 421 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 CSKP41240 450 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 MAPK8P45983 427 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 AP2S1P53680 142 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 CLDN20P56880 219 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 BTBD16Q32M84 506 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 ESCO2Q56NI9 601 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 WDR53Q7Z5U6 358 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 SLC30A8Q8IWU4 369 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 TAGAPQ8N103 731 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 DCAF4L2Q8NA75 395 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 OR8J1Q8NGP2 316 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 KLF16Q9BXK1 252 aaPredicted RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 ANKRA2Q9H9E1 313 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 RC3H2Q9HBD1 1191 aaKnown RBP14.95□□□□□ -0.02
COMMD4-215ENST00000566843 SGK2Q9HBY8 427 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 RHCGQ9UBD6 479 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 TMCC3Q9ULS5 477 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 ANGPT4Q9Y264 503 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 PCDHGB7Q9Y5F8 929 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 THSD7BQ9C0I4 1608 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 KIAA1671Q9BY89 1806 aa14.95□□□□□ -0.02
COMMD4-215ENST00000566843 NPIPB15A6NHN6 443 aaPredicted RBP14.94□□□□□ -0.02
COMMD4-215ENST00000566843 MYL12BO14950 172 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 AKR7A2O43488 359 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 PTBP1P26599 531 aaKnown RBP eCLIP14.94□□□□□ -0.02
COMMD4-215ENST00000566843 MAN2A2P49641 1150 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 WDR5P61964 334 aaKnown RBP14.94□□□□□ -0.02
COMMD4-215ENST00000566843 KCNA10Q16322 511 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 TRIM71Q2Q1W2 868 aaKnown RBP14.94□□□□□ -0.02
COMMD4-215ENST00000566843 FAM214AQ32MH5 1076 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 LEXMQ3ZCV2 418 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 FLYWCH1Q4VC44 716 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 C22orf42Q6IC83 251 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 MZT2BQ6NZ67 158 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 METAP1DQ6UB28 335 aaPredicted RBP14.94□□□□□ -0.02
COMMD4-215ENST00000566843 CEACAM20Q6UY09 585 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 ZNF730Q6ZMV8 503 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 SLC38A6Q8IZM9 456 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 OR4K1Q8NGD4 311 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 PXYLP1Q8TE99 480 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 AP3S1Q92572 193 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 CLP1Q92989 425 aaKnown RBP14.94□□□□□ -0.02
COMMD4-215ENST00000566843 KCTD7Q96MP8 289 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 SYNDIG1Q9H7V2 258 aa14.94□□□□□ -0.02
COMMD4-215ENST00000566843 ING3Q9NXR8 418 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms