RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TBC1D3KA0A087X1G2 549 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 TBC1D3FA6NER0 549 aaPredicted RBP17.78■□□□□ 0.44
MSLN-207ENST00000566549 TBC1D3LB9A6J9 549 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 K7EQS6 105 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 IFNA14P01570 189 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 TBC1D3HP0C7X1 549 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 EIF2DP41214 584 aaKnown RBP17.78■□□□□ 0.44
MSLN-207ENST00000566549 RXRGP48443 463 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 NUDT6P53370 316 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 PRDX1Q06830 199 aaKnown RBP17.78■□□□□ 0.44
MSLN-207ENST00000566549 SAXO2Q658L1 398 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 TBC1D3GQ6DHY5 549 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 TBC1D3CQ6IPX1 549 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 TBC1D3Q8IZP1 549 aaPredicted RBP17.78■□□□□ 0.44
MSLN-207ENST00000566549 NEURL3Q96EH8 262 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 PIP5K1AQ99755 562 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 THSD1Q9NS62 852 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 RECKO95980 971 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 TFPTP0C1Z6 253 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 ALPPL2P10696 532 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 ITGA2P17301 1181 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 IGFALSP35858 605 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 XCR1P46094 333 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 CXCR4P61073 352 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 RPS21P63220 83 aaKnown RBP17.78■□□□□ 0.44
MSLN-207ENST00000566549 ENPP2Q13822 863 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 ZNF793Q6ZN11 406 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 OLIG3Q7RTU3 272 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 ARMC8Q8IUR7 673 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 NLGN4XQ8N0W4 816 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 OR52E1Q8NGJ3 308 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 B4GALNT2Q8NHY0 566 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 PHF10Q8WUB8 498 aaKnown RBP17.78■□□□□ 0.44
MSLN-207ENST00000566549 DPH7Q9BTV6 452 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 TRMT61BQ9BVS5 477 aaKnown RBP17.78■□□□□ 0.44
MSLN-207ENST00000566549 PREBQ9HCU5 417 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 SIRT3Q9NTG7 399 aaPredicted RBP17.78■□□□□ 0.44
MSLN-207ENST00000566549 SELENONQ9NZV5 590 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 C4orf51C9J302 202 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 MAGEB3O15480 346 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 RNGTTO60942 597 aaKnown RBP17.77■□□□□ 0.44
MSLN-207ENST00000566549 GADD45GO95257 159 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 BCL6P41182 706 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 KIR2DL1P43626 348 aaPredicted RBP17.77■□□□□ 0.44
MSLN-207ENST00000566549 PUM1Q14671 1186 aaKnown RBP eCLIP17.77■□□□□ 0.44
MSLN-207ENST00000566549 CTF1Q16619 201 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 OR4C11Q6IEV9 310 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 HMGN2P46Q86SG4 172 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 CCDC103Q8IW40 242 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 OR5D16Q8NGK9 328 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 PROX1Q92786 737 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 QRFPRQ96P65 431 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 RSPO3Q9BXY4 272 aaPredicted RBP17.77■□□□□ 0.44
MSLN-207ENST00000566549 BTBD1Q9H0C5 482 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 ACER3Q9NUN7 267 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 ETAA1Q9NY74 926 aa17.77■□□□□ 0.44
MSLN-207ENST00000566549 J3QRK9 145 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 DNAJB5O75953 348 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 IFNW1P05000 195 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 LCKP06239 509 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 PCBP4P57723 403 aaKnown RBP17.77■□□□□ 0.43
MSLN-207ENST00000566549 OCA2Q04671 838 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 NDUFAF5Q5TEU4 345 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 FBXL6Q8N531 539 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 CREB3L4Q8TEY5 395 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 PDXPQ96GD0 296 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 NEUROD4Q9HD90 331 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 MRPS30Q9NP92 439 aaKnown RBP17.77■□□□□ 0.43
MSLN-207ENST00000566549 ACOT13Q9NPJ3 140 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 SCHIP1Q9P0W5 487 aaPredicted RBP17.77■□□□□ 0.43
MSLN-207ENST00000566549 SLC6A14Q9UN76 642 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 PCDHGB1Q9Y5G3 927 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 DENND4AQ7Z401 1863 aa17.77■□□□□ 0.43
MSLN-207ENST00000566549 ATG2AQ2TAZ0 1938 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 HAT1O14929 419 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 LAMP2P13473 410 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 C21orf33P30042 268 aaPredicted RBP17.76■□□□□ 0.43
MSLN-207ENST00000566549 GGT2P36268 569 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 TMEM236Q5W0B7 351 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 KIAA1161Q6NSJ0 714 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 ANKRD13BQ86YJ7 626 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 TAGAPQ8N103 731 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 TMEM145Q8NBT3 493 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 VANGL1Q8TAA9 524 aaPredicted RBP17.76■□□□□ 0.43
MSLN-207ENST00000566549 C1QTNF2Q9BXJ5 285 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 SPHK1Q9NYA1 384 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 CA5BQ9Y2D0 317 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 PCDHGA2Q9Y5H1 932 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 ENPP4Q9Y6X5 453 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 LRIT2A6NDA9 550 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 HMGN4O00479 90 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 TOR1BO14657 336 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 ERAL1O75616 437 aaKnown RBP17.76■□□□□ 0.43
MSLN-207ENST00000566549 DNTTP04053 509 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 ANXA8P13928 327 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 PKLRP30613 574 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 GPC1P35052 558 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 CCT3P49368 545 aaKnown RBP17.76■□□□□ 0.43
MSLN-207ENST00000566549 PRKAG1P54619 331 aa17.76■□□□□ 0.43
MSLN-207ENST00000566549 LIM2P55344 173 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms