RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 ZCCHC8Q6NZY4 707 aaKnown RBP16.84■□□□□ 0.29
GDE1-203ENST00000564172 C8orf82Q6P1X6 216 aaPredicted RBP16.84■□□□□ 0.29
GDE1-203ENST00000564172 ARMC8Q8IUR7 673 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 FAM109AQ8N4B1 249 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 SIRT5Q9NXA8 310 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 LEF1Q9UJU2 399 aaPredicted RBP16.84■□□□□ 0.29
GDE1-203ENST00000564172 OR6C74A6NCV1 312 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 SAP18O00422 153 aaKnown RBP16.84■□□□□ 0.29
GDE1-203ENST00000564172 HRH2P25021 359 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 GRK3P35626 688 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 CYP4F2P78329 520 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 GNA13Q14344 377 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 FAM174BQ3ZCQ3 159 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 UBE2UQ5VVX9 321 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 FAM205BPQ63HN1 556 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 ZNF425Q6IV72 752 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 BNC2Q6ZN30 1099 aaPredicted RBP16.84■□□□□ 0.29
GDE1-203ENST00000564172 TMEM26Q6ZUK4 368 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 SYT12Q8IV01 421 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 TMEM102Q8N9M5 508 aaPredicted RBP16.84■□□□□ 0.29
GDE1-203ENST00000564172 ZNF548Q8NEK5 533 aaPredicted RBP16.84■□□□□ 0.29
GDE1-203ENST00000564172 OR10G6Q8NH81 332 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 CCDC124Q96CT7 223 aaKnown RBP16.84■□□□□ 0.29
GDE1-203ENST00000564172 TMEM74Q96NL1 305 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 MS4A8Q9BY19 250 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 KLHL20Q9Y2M5 609 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 THADAQ6YHU6 1953 aa16.84■□□□□ 0.29
GDE1-203ENST00000564172 TRBC2A0A5B9 178 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 FAM221BA6H8Z2 402 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 M0R296 226 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 SORBS2O94875 1100 aaKnown RBP16.83■□□□□ 0.28
GDE1-203ENST00000564172 TIA1P31483 386 aaKnown RBP eCLIP16.83■□□□□ 0.28
GDE1-203ENST00000564172 SLC9A3P48764 834 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 DHPSP49366 369 aaPredicted RBP16.83■□□□□ 0.28
GDE1-203ENST00000564172 RAB39AQ14964 217 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 PGS1Q32NB8 556 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 SPANXN4Q5MJ08 99 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 LYSMD4Q5XG99 296 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 PMS2CLQ68D20 193 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 COMMD6Q7Z4G1 85 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 RIMKLAQ8IXN7 391 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 METTL4Q8N3J2 472 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 OR2A14Q96R47 310 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 SARGQ9BW04 601 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 IL1RL2Q9HB29 575 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 AKIP1Q9NQ31 210 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 PACSIN3Q9UKS6 424 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 PSME2Q9UL46 239 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 TMCC3Q9ULS5 477 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 SNX7Q9UNH6 387 aa16.83■□□□□ 0.28
GDE1-203ENST00000564172 WBP11Q9Y2W2 641 aaKnown RBP16.83■□□□□ 0.28
GDE1-203ENST00000564172 A0A1B0GVT2 93 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 LRATO95237 230 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 IL6P05231 212 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 ANXA4P09525 319 aaPredicted RBP16.82■□□□□ 0.28
GDE1-203ENST00000564172 CSTF2P33240 577 aaKnown RBP eCLIP16.82■□□□□ 0.28
GDE1-203ENST00000564172 AASDHQ4L235 1098 aaPredicted RBP16.82■□□□□ 0.28
GDE1-203ENST00000564172 PERM1Q5SV97 790 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 ZNF761Q86XN6 746 aaPredicted RBP16.82■□□□□ 0.28
GDE1-203ENST00000564172 ZC3H7AQ8IWR0 971 aaKnown RBP16.82■□□□□ 0.28
GDE1-203ENST00000564172 LILRA2Q8N149 483 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 LRRC58Q96CX6 371 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 LIN7BQ9HAP6 207 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 ACTR10Q9NZ32 417 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 ENPP5Q9UJA9 477 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 GOLGA4Q13439 2230 aaKnown RBP16.82■□□□□ 0.28
GDE1-203ENST00000564172 C7orf72A4D263 438 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 FAM25AB3EWG3 89 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 FAM25CB3EWG5 89 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 FAM25GB3EWG6 89 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 LMO7DNF2Z398 122 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 FXYD1O00168 92 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 MAN1A2O60476 641 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 SDC3O75056 442 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 DEAF1O75398 565 aaPredicted RBP16.82■□□□□ 0.28
GDE1-203ENST00000564172 KRT8P05787 483 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 PGRP06401 933 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 UGT2B7P16662 529 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 PRPS1L1P21108 318 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 GRIA3P42263 894 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 MAZP56270 477 aaKnown RBP16.82■□□□□ 0.28
GDE1-203ENST00000564172 TARDBPQ13148 414 aaKnown RBP eCLIP16.82■□□□□ 0.28
GDE1-203ENST00000564172 PMS2P3Q13401 168 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 TEAD4Q15561 434 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 PIGGQ5H8A4 983 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 KHDRBS2Q5VWX1 349 aaKnown RBP16.82■□□□□ 0.28
GDE1-203ENST00000564172 SHEQ5VZ18 495 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 LILRB2Q8N423 598 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 TMEM105Q8N8V8 129 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 TTLQ8NG68 377 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 WDR48Q8TAF3 677 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 NELL1Q92832 810 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 TESCQ96BS2 214 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 HOPXQ9BPY8 73 aaPredicted RBP16.82■□□□□ 0.28
GDE1-203ENST00000564172 TMEM74BQ9NUR3 256 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 GIMAP4Q9NUV9 329 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 SLAMF8Q9P0V8 285 aa16.82■□□□□ 0.28
GDE1-203ENST00000564172 GSAPA4D1B5 854 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 NDUFA2O43678 99 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 PCDH7O60245 1069 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms