RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 MAP1AP78559 2803 aaPredicted RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 TRGV5A0A0B4J1U4 118 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 FAM95CA0A1B0GW59 222 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 SYT5O00445 386 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 FAM155BO75949 473 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 IVDP26440 423 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 GGT5P36269 586 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 TAS2R39P59534 338 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 ZNF460Q14592 562 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 TGFBIQ15582 683 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 PIGGQ5H8A4 983 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 WDR53Q7Z5U6 358 aaPredicted RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 LRRC8AQ8IWT6 810 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 TCAIMQ8N3R3 496 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 SRFBP1Q8NEF9 429 aaKnown RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 NUBPLQ8TB37 319 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 ZNF721Q8TF20 911 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 ANKRD49Q8WVL7 239 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 PTCD3Q96EY7 689 aaKnown RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 RMND5BQ96G75 393 aaPredicted RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 VPS39Q96JC1 886 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 WDR83Q9BRX9 315 aaKnown RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 CNOT10Q9H9A5 744 aaKnown RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 POPDC3Q9HBV1 291 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 SH2D2AQ9NP31 389 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 RYDENQ9NUL5 291 aaKnown RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 DNAJC11Q9NVH1 559 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 ZNF490Q9ULM2 529 aaPredicted RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 CHMP2BQ9UQN3 213 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 PSAT1Q9Y617 370 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 TEX264Q9Y6I9 313 aa17.24■□□□□ 0.35
NME3-204ENST00000563498 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 ZNF469Q96JG9 3925 aaPredicted RBP17.24■□□□□ 0.35
NME3-204ENST00000563498 ANKHD1Q8IWZ3 2542 aaKnown RBP17.23■□□□□ 0.35
NME3-204ENST00000563498 EML6Q6ZMW3 1958 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 HSPB2A8KAH6 182 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 CLGNO14967 610 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 FOSL1P15407 271 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 ENDOUP21128 410 aaKnown RBP17.23■□□□□ 0.35
NME3-204ENST00000563498 MGAT5Q09328 741 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 MORF4L2Q15014 288 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 HSPB2Q16082 182 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 ZNF791Q3KP31 576 aaPredicted RBP17.23■□□□□ 0.35
NME3-204ENST00000563498 CDKL4Q5MAI5 379 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 HP1BP3Q5SSJ5 553 aaPredicted RBP17.23■□□□□ 0.35
NME3-204ENST00000563498 SLC22A10Q63ZE4 541 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 ADNP2Q6IQ32 1131 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 FBXW8Q8N3Y1 598 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 SREK1Q8WXA9 508 aaKnown RBP17.23■□□□□ 0.35
NME3-204ENST00000563498 ALPK1Q96QP1 1244 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 OSBPL9Q96SU4 736 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 GPATCH1Q9BRR8 931 aaKnown RBP17.23■□□□□ 0.35
NME3-204ENST00000563498 TBCDQ9BTW9 1192 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 EFCAB11Q9BUY7 163 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 CNPPD1Q9BV87 410 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 DERL2Q9GZP9 239 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 LIME1Q9H400 295 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 ZNF703Q9H7S9 590 aaPredicted RBP17.23■□□□□ 0.35
NME3-204ENST00000563498 SEMA4BQ9NPR2 832 aaPredicted RBP17.23■□□□□ 0.35
NME3-204ENST00000563498 SPRR3Q9UBC9 169 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 SPACA6W5XKT8 324 aa17.23■□□□□ 0.35
NME3-204ENST00000563498 NAV3Q8IVL0 2385 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 MYOCOSA0A1B0GUC4 107 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 PRAMEF4O60810 478 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 LDB3O75112 727 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 ETHE1O95571 254 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 COX7A2P14406 83 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 DNASE1P24855 282 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 PIGAP37287 484 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 IGLV3-21P80748 117 aaPredicted RBP17.22■□□□□ 0.35
NME3-204ENST00000563498 ASPHQ12797 758 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 ILF2Q12905 390 aaKnown RBP17.22■□□□□ 0.35
NME3-204ENST00000563498 LAPTM5Q13571 262 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 CEBPEQ15744 281 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 PRAMEF9Q5VWM5 478 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 ADGRD1Q6QNK2 874 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 DND1Q8IYX4 353 aaKnown RBP17.22■□□□□ 0.35
NME3-204ENST00000563498 LRRC25Q8N386 305 aaPredicted RBP17.22■□□□□ 0.35
NME3-204ENST00000563498 SLC15A4Q8N697 577 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 SLC22A8Q8TCC7 542 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 PAQR8Q8TEZ7 354 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 F2RL3Q96RI0 385 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 TMEM79Q9BSE2 394 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 EXO5Q9H790 373 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 ZFP64Q9NPA5 681 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 ACKR4Q9NPB9 350 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 DLL4Q9NR61 685 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 QPCTLQ9NXS2 382 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 ALKBH4Q9NXW9 302 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 CRIM1Q9NZV1 1036 aa17.22■□□□□ 0.35
NME3-204ENST00000563498 BOKQ9UMX3 212 aaPredicted RBP17.22■□□□□ 0.35
NME3-204ENST00000563498 NCF1BA6NI72 391 aaPredicted RBP17.21■□□□□ 0.35
NME3-204ENST00000563498 NCF1CA8MVU1 366 aaPredicted RBP17.21■□□□□ 0.35
NME3-204ENST00000563498 CES2O00748 559 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 TAPBPO15533 448 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 PROM1O43490 865 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 SCELO95171 688 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 IGKV3-11P04433 115 aa17.21■□□□□ 0.35
NME3-204ENST00000563498 NCF1P14598 390 aaPredicted RBP17.21■□□□□ 0.35
NME3-204ENST00000563498 ATP5A1P25705 553 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms