RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ZNF319Q9P2F9 582 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 ANKMY1Q9P2S6 941 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 TRIM10Q9UDY6 481 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 TBK1Q9UHD2 729 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 PRDM4Q9UKN5 801 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 WDR37Q9Y2I8 494 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 KIF7Q2M1P5 1343 aa2.81□□□□□ -1.96
SHCBP1-202ENST00000563219 SPATA31D1Q6ZQQ2 1576 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 SNED1Q8TER0 1413 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 A0A1W2PR80 420 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 SRRM4A7MD48 611 aaKnown RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ANHXE9PGG2 379 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 MAGEC1O60732 1142 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 PEX11AO75192 247 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 OR6A2O95222 327 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 SYNGR4O95473 234 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 AK1P00568 194 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 IGHDP01880 384 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 MMP10P09238 476 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 RNF224P0DH78 156 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 PAICSP22234 425 aaKnown RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 GPX3P22352 226 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 CYP2F1P24903 491 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 SOX3P41225 446 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 LEPRP48357 1165 aaKnown RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 CCL11P51671 97 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 CLCN4P51793 760 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 TRA2BP62995 288 aaKnown RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 GABPB1Q06547 395 aaPredicted RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 SRSF9Q13242 221 aaKnown RBP eCLIP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 MSLNQ13421 630 aaPredicted RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 GPR50Q13585 617 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 RAPSNQ13702 412 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 INAQ16352 499 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 C3AR1Q16581 482 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ZFP69Q49AA0 526 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ATP1A1-AS1Q5TC04 95 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 NKAIN2Q5VXU1 208 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 RTL6Q6ICC9 239 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 SULT1C3Q6IMI6 304 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 BHLHB9Q6PI77 547 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 FIP1L1Q6UN15 594 aaKnown RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 CD164L2Q6UWJ8 174 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 LEKR1Q6ZMV7 388 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 RFPL4BQ6ZWI9 263 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ARMCX2Q7L311 632 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNF444Q8N0Y2 327 aaPredicted RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 TEX26Q8N6G2 289 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 LRRC17Q8N6Y2 441 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 BANPQ8N9N5 519 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 SIDT2Q8NBJ9 832 aaKnown RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNF540Q8NDQ6 660 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 OR56B1Q8NGI3 324 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 HCAR2Q8TDS4 363 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 PHYHIPQ92561 330 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ARHGAP45Q92619 1136 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 AZIN2Q96A70 460 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 MAGED4Q96JG8 741 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 DEFB118Q96PH6 123 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 PCDHB18PQ96TA0 734 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 NKX3-1Q99801 234 aaPredicted RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 SPAG8Q99932 426 aaPredicted RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 THUMPD2Q9BTF0 503 aaKnown RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 TEX13BQ9BXU2 312 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 CCSER1Q9C0I3 900 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 WWP1Q9H0M0 922 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 CXXC4Q9H2H0 198 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 MARCH7Q9H992 704 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 PLCXD1Q9NUJ7 323 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 BARHL2Q9NY43 387 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 AATFQ9NY61 560 aaKnown RBP eCLIP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 CNOT2Q9NZN8 540 aaKnown RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 FBXL4Q9UKA2 621 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ERVK-19Q9WJR5 959 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ENTPD4Q9Y227 616 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 PLEKHA6Q9Y2H5 1048 aa2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 MRPS28Q9Y2Q9 187 aaKnown RBP2.8□□□□□ -1.96
SHCBP1-202ENST00000563219 ABCC4O15439 1325 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 NEDD4P46934 1319 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 SHISA7A6NL88 538 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 C15orf61A6NNL5 157 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 NDC80O14777 642 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 SSX5O60225 188 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 CSO75390 466 aaKnown RBP2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 ANXA9O76027 345 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 CXCL10P02778 98 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 CA3P07451 260 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 SFTPBP07988 381 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 ANPEPP15144 967 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 PPP2R1AP30153 589 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 PRDX2P32119 198 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 TNFRSF4P43489 277 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 ASMTP46597 345 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 OR3A2P47893 321 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 LIMK2P53671 638 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 PEX3P56589 373 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 BACE1P56817 501 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 SNRPD1P62314 119 aaKnown RBP2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 CSNK2BP67870 215 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 NUCB2P80303 420 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms