RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 EXOSC8Q96B26 276 aaKnown RBP18.43■□□□□ 0.54
IRF9-215ENST00000561415 MIEF2Q96C03 454 aa18.43■□□□□ 0.54
IRF9-215ENST00000561415 CMKLR1Q99788 373 aa18.43■□□□□ 0.54
IRF9-215ENST00000561415 HOPXQ9BPY8 73 aaPredicted RBP18.43■□□□□ 0.54
IRF9-215ENST00000561415 GPATCH1Q9BRR8 931 aaKnown RBP18.43■□□□□ 0.54
IRF9-215ENST00000561415 SLC39A3Q9BRY0 314 aa18.43■□□□□ 0.54
IRF9-215ENST00000561415 CADM1Q9BY67 442 aaKnown RBP18.43■□□□□ 0.54
IRF9-215ENST00000561415 RPF2Q9H7B2 306 aaKnown RBP18.43■□□□□ 0.54
IRF9-215ENST00000561415 SLC35C2Q9NQQ7 365 aa18.43■□□□□ 0.54
IRF9-215ENST00000561415 HCN3Q9P1Z3 774 aa18.43■□□□□ 0.54
IRF9-215ENST00000561415 PCDHGA7Q9Y5G6 932 aa18.43■□□□□ 0.54
IRF9-215ENST00000561415 WDFY3Q8IZQ1 3526 aa18.43■□□□□ 0.54
IRF9-215ENST00000561415 SCN2AQ99250 2005 aa18.43■□□□□ 0.54
IRF9-215ENST00000561415 A0A096LPI6 279 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 TMX2-CTNND1H3BSU7 103 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 RFXANKO14593 260 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 GSC2O15499 205 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 PDPK1O15530 556 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 ERN1O75460 977 aaKnown RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 TIAF1O95411 115 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 RNH1P13489 461 aaKnown RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 ALAS2P22557 587 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 FRKP42685 505 aaPredicted RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 TRPC1P48995 793 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 PCBP4P57723 403 aaKnown RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 ISXQ2M1V0 245 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 LRIF1Q5T3J3 769 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 PRMT9Q6P2P2 845 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 TMEM126BQ8IUX1 230 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 SHISA5Q8N114 240 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 METTL27Q8N6F8 245 aaPredicted RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 ADAMTS18Q8TE60 1221 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 PANX1Q96RD7 426 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 INPP5KQ9BT40 448 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 STRADBQ9C0K7 418 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 PAIP1Q9H074 479 aaKnown RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 APMAPQ9HDC9 416 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 AKAP7Q9P0M2 348 aaPredicted RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 NDOR1Q9UHB4 597 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 CDC14AQ9UNH5 594 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 CLCA2Q9UQC9 943 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 NEUROG3Q9Y4Z2 214 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 PCDHB3Q9Y5E6 796 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 WASHC1A8K0Z3 465 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 SCRG1O75711 98 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 DKK1O94907 266 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 HOXB9P17482 250 aaPredicted RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 EFNA1P20827 205 aaPredicted RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 PTPN6P29350 595 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 PSME3P61289 254 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 MC2RQ01718 297 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 CAPRIN1Q14444 709 aaKnown RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 PWWP2BQ6NUJ5 590 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 FAM180BQ6P0A1 224 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 DHRS13Q6UX07 377 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 DNAJC14Q6Y2X3 702 aaPredicted RBP18.42■□□□□ 0.54
IRF9-215ENST00000561415 KIAA2013Q8IYS2 634 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 SLAMF7Q9NQ25 335 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 FBXO8Q9NRD0 319 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 VAPAQ9P0L0 249 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 PSME2Q9UL46 239 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 ERVK-11Q9UQG0 969 aa18.42■□□□□ 0.54
IRF9-215ENST00000561415 TRBV5-3A0A0A0MS03 114 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 POLR1CO15160 346 aaPredicted RBP18.41■□□□□ 0.54
IRF9-215ENST00000561415 CCL4P13236 92 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 CDKN2CP42773 168 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 KCNJ2P63252 427 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 MAT1AQ00266 395 aaKnown RBP18.41■□□□□ 0.54
IRF9-215ENST00000561415 DSG2Q14126 1118 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.41■□□□□ 0.54
IRF9-215ENST00000561415 SLCO6A1Q86UG4 719 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 MCUR1Q96AQ8 359 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 CNRIP1Q96F85 164 aaPredicted RBP18.41■□□□□ 0.54
IRF9-215ENST00000561415 ZBED6CLQ96FA7 236 aaPredicted RBP18.41■□□□□ 0.54
IRF9-215ENST00000561415 LIN37Q96GY3 246 aaPredicted RBP18.41■□□□□ 0.54
IRF9-215ENST00000561415 CGREF1Q99674 301 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 SPAG4Q9NPE6 437 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 SLC6A13Q9NSD5 602 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 ACSS1Q9NUB1 689 aaPredicted RBP18.41■□□□□ 0.54
IRF9-215ENST00000561415 MAU2Q9Y6X3 613 aa18.41■□□□□ 0.54
IRF9-215ENST00000561415 A0A1W2PRB8 838 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 B4E171 279 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 ERAL1O75616 437 aaKnown RBP18.4■□□□□ 0.54
IRF9-215ENST00000561415 CSRP1P21291 193 aaKnown RBP18.4■□□□□ 0.54
IRF9-215ENST00000561415 SLC6A2P23975 617 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 TSPAN7P41732 249 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 OR1D4P47884 311 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 HBA1P69905 142 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 SIM1P81133 766 aaPredicted RBP18.4■□□□□ 0.54
IRF9-215ENST00000561415 CEBPEQ15744 281 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 SYT16Q17RD7 645 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 BNC2Q6ZN30 1099 aaPredicted RBP18.4■□□□□ 0.54
IRF9-215ENST00000561415 TMEM52Q8NDY8 209 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 OR51Q1Q8NH59 317 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 GOT1L1Q8NHS2 421 aaPredicted RBP18.4■□□□□ 0.54
IRF9-215ENST00000561415 NETO1Q8TDF5 533 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 THTPAQ9BU02 230 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 SLC7A5P2Q9GIP4 190 aa18.4■□□□□ 0.54
IRF9-215ENST00000561415 MMADHCQ9H3L0 296 aaPredicted RBP18.4■□□□□ 0.54
IRF9-215ENST00000561415 SLC25A37Q9NYZ2 338 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms