RNA–Protein interactions for RNA: ENST00000561366.1

IDH3A-223, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 3 BASIC

Gene IDH3A, Length 389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-223	ENST00000561366	NSG1	A0A0A6YYJ2	146 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	SERTM1	A2A2V5	107 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366		A8MUI8	341 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366		K7ENP7	123 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	SDHD	O14521	159 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	LSM1	O15116	133 aa	Known RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	PRKN	O60260	465 aa	Predicted RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	CTNS	O60931	367 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	CD63	P08962	238 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	NR2F6	P10588	404 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	ACPP	P15309	386 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	EFNA1	P20827	205 aa	Predicted RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	MMP11	P24347	488 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	MDH1	P40925	334 aa	Known RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	BUD31	P41223	144 aa	Predicted RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	PGD	P52209	483 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	HK2	P52789	917 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	AQP5	P55064	265 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	TNFRSF17	Q02223	184 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	FOLH1	Q04609	750 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	KIAA0040	Q15053	153 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	TBR1	Q16650	682 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	UGT8	Q16880	541 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	ATP6AP1L	Q52LC2	224 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	SPIN4	Q56A73	249 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	COLEC12	Q5KU26	742 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	C6orf136	Q5SQH8	315 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	C10orf62	Q5T681	223 aa	Predicted RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	FCRLB	Q6BAA4	426 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	NIPAL1	Q6NVV3	410 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	INO80C	Q6PI98	192 aa	Predicted RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	DGAT2L6	Q6ZPD8	337 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	CPEB2	Q7Z5Q1	589 aa	Known RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	MRGPRE	Q86SM8	312 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	TICAM1	Q8IUC6	712 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	LRRC34	Q8IZ02	419 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	TMEM132C	Q8N3T6	1108 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	LIX1	Q8N485	282 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	PLPP5	Q8NEB5	264 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	OR11G2	Q8NGC1	345 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	RFWD2	Q8NHY2	731 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	RAB3IL1	Q8TBN0	382 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	ANKRD9	Q96BM1	317 aa	Predicted RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	MAGED4	Q96JG8	741 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	PPP3R2	Q96LZ3	170 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	OR1F2P	Q96R84	312 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	OR52B2	Q96RD2	323 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	FAIM2	Q9BWQ8	316 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	TRIM55	Q9BYV6	548 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	TGIF2	Q9GZN2	237 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	WDR41	Q9HAD4	459 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	NPHS2	Q9NP85	383 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	SEMA3G	Q9NS98	782 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	MCM8	Q9UJA3	840 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	DCTN4	Q9UJW0	460 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	ADAM29	Q9UKF5	820 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	RALY	Q9UKM9	306 aa	Known RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	EIF3L	Q9Y262	564 aa	Known RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	MRPS33	Q9Y291	106 aa	Known RBP	6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	PCDHA9	Q9Y5H5	950 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	USH1C	Q9Y6N9	552 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	WDFY3	Q8IZQ1	3526 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	SDK2	Q58EX2	2172 aa		6.62	□□□□□ -1.35
IDH3A-223	ENST00000561366	CACNA1A	O00555	2505 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366		C9JVG2	144 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	HRK	O00198	91 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	KLF11	O14901	512 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	HDAC3	O15379	428 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	OR10H2	O60403	315 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	GUCY1B2	O75343	617 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	NME6	O75414	186 aa	Predicted RBP	6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	SCEL	O95171	688 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	GPR75	O95800	540 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	F10	P00742	488 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	IGHE	P01854	428 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	G6PD	P11413	515 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	COX6A1	P12074	109 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	BCKDHA	P12694	445 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	LBP	P18428	481 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	SDC1	P18827	310 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	NT5E	P21589	574 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	IL10	P22301	178 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	ITGA3	P26006	1051 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	PIK3R1	P27986	724 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	IDH3A	P50213	366 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	XK	P51811	444 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	DIO3	P55073	304 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	UCN	P55089	124 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	DUSP2	Q05923	314 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	ZNF33B	Q06732	778 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366		Q0VFX4	171 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	PTGR1	Q14914	329 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	PCOLCE	Q15113	449 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	LTB4R	Q15722	352 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	BTBD16	Q32M84	506 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	PGS1	Q32NB8	556 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	XKR7	Q5GH72	579 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	TMEM198	Q66K66	360 aa		6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	PAPD4	Q6PIY7	484 aa	Known RBP	6.61	□□□□□ -1.35
IDH3A-223	ENST00000561366	TMEM205	Q6UW68	189 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms