RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 RIF1Q5UIP0 2472 aaKnown RBP16.9■□□□□ 0.3
SNX1-208ENST00000559844 E2F6O75461 281 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 PGM3O95394 542 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 SNAP29O95721 258 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 CRATP43155 626 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 DEFB133Q30KQ1 61 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.89■□□□□ 0.3
SNX1-208ENST00000559844 GCNT6Q5T4J0 391 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 TTC33Q6PID6 262 aaPredicted RBP16.89■□□□□ 0.3
SNX1-208ENST00000559844 ANGPTL8Q6UXH0 198 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 NAGSQ8N159 534 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 FAM46DQ8NEK8 389 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 SAP25Q8TEE9 199 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 EDEM2Q9BV94 578 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 OSBPL10Q9BXB5 764 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 SLC6A16Q9GZN6 736 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 RXFP3Q9NSD7 469 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 SCHIP1Q9P0W5 487 aaPredicted RBP16.89■□□□□ 0.3
SNX1-208ENST00000559844 PCOLCE2Q9UKZ9 415 aa16.89■□□□□ 0.3
SNX1-208ENST00000559844 ASCC3Q8N3C0 2202 aaKnown RBP16.89■□□□□ 0.29
SNX1-208ENST00000559844 IGKV1-8A0A0C4DH67 115 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 LMO7DNF2Z398 122 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 SEMG1P04279 462 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 FABP3P05413 133 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 UQCRC2P22695 453 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 CHI3L1P36222 383 aaPredicted RBP16.89■□□□□ 0.29
SNX1-208ENST00000559844 ARFIP1P53367 373 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 NR1H2P55055 460 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 SPIDRQ14159 915 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 PRR23CQ6ZRP0 262 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 USP51Q70EK9 711 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 ASCL5Q7RTU5 278 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 SDR16C5Q8N3Y7 309 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 CREB3L4Q8TEY5 395 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 OR5P2Q8WZ92 322 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 DDX31Q9H8H2 851 aaKnown RBP16.89■□□□□ 0.29
SNX1-208ENST00000559844 OR6C2Q9NZP2 312 aa16.89■□□□□ 0.29
SNX1-208ENST00000559844 RTCAO00442 366 aaKnown RBP16.88■□□□□ 0.29
SNX1-208ENST00000559844 LCMT2O60294 686 aaKnown RBP16.88■□□□□ 0.29
SNX1-208ENST00000559844 FKBP9O95302 570 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 EML2O95834 649 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 TFAP2AP05549 437 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 GNAO1P09471 354 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 AHRP35869 848 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 DCTP40126 519 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 ARHGDIAP52565 204 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 MVDP53602 400 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 TUBA4AP68366 448 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 ELOAQ14241 798 aaKnown RBP16.88■□□□□ 0.29
SNX1-208ENST00000559844 ZIC1Q15915 447 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 OR4C11Q6IEV9 310 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 SPESP1Q6UW49 350 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 ISLR2Q6UXK2 745 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 ADGRF3Q8IZF5 1079 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 OR2L3Q8NG85 312 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 ZFP28Q8NHY6 868 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 SARGQ9BW04 601 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 YIPF3Q9GZM5 350 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 TMEM38AQ9H6F2 299 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 SLC6A20Q9NP91 592 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 SNX7Q9UNH6 387 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 CSNK1G3Q9Y6M4 447 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 TNFRSF21O75509 655 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 NUDT7P0C024 238 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 ATP6V1B1P15313 513 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 TGM1P22735 817 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 SOAT1P35610 550 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 PPP2R2BQ00005 443 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 TTC23Q5W5X9 447 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 OR2T5Q6IEZ7 315 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 KANSL1Q7Z3B3 1105 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 AMIGO1Q86WK6 493 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 SLC30A8Q8IWU4 369 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 OR2T29Q8NH02 315 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 FBXL20Q96IG2 436 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 HSH2DQ96JZ2 352 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 YTHDF1Q9BYJ9 559 aaKnown RBP16.88■□□□□ 0.29
SNX1-208ENST00000559844 NLNQ9BYT8 704 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 LHX9Q9NQ69 397 aa16.88■□□□□ 0.29
SNX1-208ENST00000559844 TUBA8Q9NY65 449 aaPredicted RBP16.88■□□□□ 0.29
SNX1-208ENST00000559844 LRIT2A6NDA9 550 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 B4DGG1 531 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 CDX4O14627 284 aaPredicted RBP16.87■□□□□ 0.29
SNX1-208ENST00000559844 PDPK1O15530 556 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 SUV39H1O43463 412 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 PCDHGA12O60330 932 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 NOBOXO60393 691 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 SERPIND1P05546 499 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 F3P13726 295 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 BCL6P41182 706 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 PRIM2P49643 509 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 C16orf72Q14CZ0 275 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 PRSS53Q2L4Q9 553 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 ZNF630Q2M218 657 aaPredicted RBP16.87■□□□□ 0.29
SNX1-208ENST00000559844 RFX4Q33E94 735 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 SHQ1Q6PI26 577 aaKnown RBP16.87■□□□□ 0.29
SNX1-208ENST00000559844 PIWIL3Q7Z3Z3 882 aaKnown RBP16.87■□□□□ 0.29
SNX1-208ENST00000559844 UBE3DQ7Z6J8 389 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 SATL1Q86VE3 508 aa16.87■□□□□ 0.29
SNX1-208ENST00000559844 SFTPA2Q8IWL1 248 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms