RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ATP4BP51164 291 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 CLDN8P56748 225 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 PCBP4P57723 403 aaKnown RBP13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 TAS2R50P59544 299 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 DNASE1L3Q13609 305 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 PTGR1Q14914 329 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 TGIF1Q15583 401 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 PRSS53Q2L4Q9 553 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 NDUFAF5Q5TEU4 345 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 TMEM198Q66K66 360 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 C18orf63Q68DL7 685 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 SLC48A1Q6P1K1 146 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 TMEM205Q6UW68 189 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 LIX1Q8N485 282 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 ENDOVQ8N8Q3 282 aaKnown RBP13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 ADAMTS17Q8TE56 1095 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 UCN3Q969E3 161 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 NACC2Q96BF6 587 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 ANKRD9Q96BM1 317 aaPredicted RBP13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 MTERF3Q96E29 417 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 PEX11GQ96HA9 241 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 ZNF681Q96N22 645 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 C1orf50Q9BV19 199 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 EBPLQ9BY08 206 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 TMEM45AQ9NWC5 275 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 ATP6V1HQ9UI12 483 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 DCTN4Q9UJW0 460 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 CROTQ9UKG9 612 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 FBXW2Q9UKT8 454 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 TCFL5Q9UL49 500 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 MMACHCQ9Y4U1 282 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 ACACAQ13085 2346 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 APC2O95996 2303 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 GNG14A0A1W2PPG7 69 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 C9J4A7 227 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 TAF4O00268 1085 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 PGRMC2O15173 223 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 CTNSO60931 367 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 GUCY1B2O75343 617 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 MYO1DO94832 1006 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 FURINP09958 794 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 NR2F6P10588 404 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 TCN2P20062 427 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 CPN2P22792 545 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 JAK1P23458 1154 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 PTPN4P29074 926 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 BUD31P41223 144 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 FRKP42685 505 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 ASMTP46597 345 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 GSTA3Q16772 222 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 CRTC2Q53ET0 693 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 ACAD11Q709F0 780 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 MMP21Q8N119 569 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 CPSF7Q8N684 471 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 ZNF248Q8NDW4 579 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 TANKQ92844 425 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 THOC1Q96FV9 657 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 DPH1Q9BZG8 443 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 VN1R1Q9GZP7 353 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 RPF2Q9H7B2 306 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 SLC52A3Q9NQ40 469 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 BAIAP2L1Q9UHR4 511 aa13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 EIF3LQ9Y262 564 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 FARSAQ9Y285 508 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-207ENST00000559309 LOC102723996A0A087X1L8 192 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 A0A0G2JND7 137 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 TCRBV16S1A1N1A0A5B0 115 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 ARHGAP10A1A4S6 786 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 WASHC1A8K0Z3 465 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 IDSB3KWA1 339 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 PCDH17O14917 1159 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 UBDO15205 165 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 PRKRAO75569 313 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 FAM107AO95990 144 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 IDO1P14902 403 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 GPX3P22352 226 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 SOX18P35713 384 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 EIF2S3P41091 472 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 ARFIP2P53365 341 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 FOXL2P58012 376 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 MC1RQ01726 317 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 OCA2Q04671 838 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 ERV3-1Q14264 604 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 HEPACAMQ14CZ8 416 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 UGT8Q16880 541 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 MPEG1Q2M385 716 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 OR52E8Q6IFG1 317 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 RIPOR1Q6ZS17 1223 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 SPATA21Q7Z572 469 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 FAM9CQ8IZT9 166 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 ANKS4BQ8N8V4 417 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 FAM47BQ8NA70 645 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 TESCQ96BS2 214 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 MIEF2Q96C03 454 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 COQ8BQ96D53 544 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 SLC45A3Q96JT2 553 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 TEX37Q96LM6 180 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 TSSK3Q96PN8 268 aa13.91□□□□□ -0.18
SNRPA1-207ENST00000559309 CCT8L2Q96SF2 557 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms