RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ZNF793Q6ZN11 406 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 SHISA6Q6ZSJ9 500 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 VASH2Q86V25 355 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 DTX1Q86Y01 620 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 C1orf52Q8N6N3 182 aaKnown RBP11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 GBP7Q8N8V2 638 aaPredicted RBP11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 ACOT4Q8N9L9 421 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 KCNE4Q8WWG9 221 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 UTP4Q969X6 686 aaKnown RBP11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 MVB12AQ96EY5 273 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 APIPQ96GX9 242 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 PEX11GQ96HA9 241 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 QRFPRQ96P65 431 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 SERINC2Q96SA4 455 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 TBCDQ9BTW9 1192 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 NUF2Q9BZD4 464 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 SLC22A11Q9NSA0 550 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 GIMAP2Q9UG22 337 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 CROTQ9UKG9 612 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 FBXW2Q9UKT8 454 aa11.35□□□□□ -0.59
HMGB1P8-201ENST00000558211 ARHGAP10A1A4S6 786 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 KLK10O43240 276 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 SEC22BO75396 215 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 EEDO75530 441 aaKnown RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 JUNP05412 331 aaKnown RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 HIST1H1TP22492 207 aaPredicted RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 BSGP35613 385 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 STAT5AP42229 794 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 RPS18P62269 152 aaKnown RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 OCA2Q04671 838 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 ZNF33BQ06732 778 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 ACSM2AQ08AH3 577 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 SRSF6Q13247 344 aaKnown RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 SLAMF1Q13291 335 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 DNASE1L3Q13609 305 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 MAP7Q14244 749 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 VWA2Q5GFL6 755 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 MFSD4BQ5TF39 518 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 FAM69BQ5VUD6 431 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 ACSM2BQ68CK6 577 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 CYP20A1Q6UW02 462 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 Q6ZSR9 355 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 COX15Q7KZN9 410 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 OVCH1Q7RTY7 1134 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 CA13Q8N1Q1 262 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 METTL4Q8N3J2 472 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 ENDOVQ8N8Q3 282 aaKnown RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 ZNF248Q8NDW4 579 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 OR2T11Q8NH01 316 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 OR51Q1Q8NH59 317 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 THOC1Q96FV9 657 aaKnown RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 C3orf30Q96M34 536 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 DPH2Q9BQC3 489 aaPredicted RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 EBPLQ9BY08 206 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 ROGDIQ9GZN7 287 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 ZNF282Q9UDV7 671 aaPredicted RBP11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 ACSL6Q9UKU0 697 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 PPT2Q9UMR5 302 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 HIF3AQ9Y2N7 669 aa11.34□□□□□ -0.59
HMGB1P8-201ENST00000558211 FAM227AF5H4B4 570 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 PSMD12O00232 456 aaPredicted RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 PEX11AO75192 247 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 JRKO75564 520 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 CDC123O75794 336 aaPredicted RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 SEMA3DO95025 777 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 VIMP08670 466 aaKnown RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 F8A1P23610 371 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 XCR1P46094 333 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 RPS15P62841 145 aaKnown RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 TBL3Q12788 808 aaKnown RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 SF3A3Q12874 501 aaKnown RBP eCLIP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 CCNYL2Q5T2Q4 361 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 VWA5B1Q5TIE3 1220 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 NIPAL1Q6NVV3 410 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 FAM198BQ6UWH4 519 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 PAGE2Q7Z2X7 111 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 COMMD6Q7Z4G1 85 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 NUDT13Q86X67 352 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 TMEM151BQ8IW70 566 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 WDR75Q8IWA0 830 aaKnown RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 KIRREL3Q8IZU9 778 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 CDC26Q8NHZ8 85 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 PIWIL2Q8TC59 973 aaKnown RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 STT3BQ8TCJ2 826 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 CHTF18Q8WVB6 975 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 KIAA1143Q96AT1 154 aaPredicted RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 MIEF2Q96C03 454 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 TUBGCP3Q96CW5 907 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 C19orf60Q96EN9 201 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 C7orf26Q96N11 449 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 MAPKAP1Q9BPZ7 522 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 ZNF717Q9BY31 904 aaPredicted RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 GPN2Q9H9Y4 310 aaPredicted RBP11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 LRTM1Q9HBL6 345 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 PFDN4Q9NQP4 134 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 RIC8BQ9NVN3 520 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 HAO1Q9UJM8 370 aa11.33□□□□□ -0.6
HMGB1P8-201ENST00000558211 FARSAQ9Y285 508 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms