RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 BPIFB3P59826 476 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 UNQ6126/PRO20091Q6UXV3 157 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 GSTA5Q7RTV2 222 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 SZRD1Q7Z422 152 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 PTAR1Q7Z6K3 402 aaPredicted RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 EXOC3L1Q86VI1 746 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 CARNMT1Q8N4J0 409 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 ZNF441Q8N8Z8 693 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 CCDC112Q8NEF3 446 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 FDCSPQ8NFU4 85 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 OR6C4Q8NGE1 309 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 HMGCLL1Q8TB92 370 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 FAM120BQ96EK7 910 aaKnown RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 PKNOX2Q96KN3 472 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 NCAPGQ9BPX3 1015 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 ING2Q9H160 280 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 RDH14Q9HBH5 336 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 LRRC4Q9HBW1 653 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 CCDC177Q9NQR7 707 aaPredicted RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 FGF21Q9NSA1 209 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 RBM28Q9NW13 759 aaKnown RBP5.38□□□□□ -1.55
RTF1-204ENST00000558117 IL37Q9NZH6 218 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 KCNG2Q9UJ96 466 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 ADAM18Q9Y3Q7 739 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 KCNE2Q9Y6J6 123 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 FER1L5A0AVI2 2057 aa5.38□□□□□ -1.55
RTF1-204ENST00000558117 FAM92AA1XBS5 289 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 HNRNPCL2B2RXH8 293 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 TULP2O00295 520 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 PHF1O43189 567 aaPredicted RBP5.37□□□□□ -1.55
RTF1-204ENST00000558117 FAM189A1O60320 539 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 TSPAN9O75954 239 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 BEST1O76090 585 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 CPNE6O95741 557 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 IGHDP01880 384 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 ATP5BP06576 529 aaKnown RBP5.37□□□□□ -1.55
RTF1-204ENST00000558117 ATP6V1B1P15313 513 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 BDKRB2P30411 391 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 ARL3P36405 182 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 TNNT3P45378 269 aaPredicted RBP5.37□□□□□ -1.55
RTF1-204ENST00000558117 MED22Q15528 200 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 KRTAP24-1Q3LI83 254 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 CDONQ4KMG0 1287 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 SIGIRRQ6IA17 410 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 FAM47EQ6ZV65 393 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 CUZD1Q86UP6 607 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 SFR1Q86XK3 245 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 ODF3L1Q8IXM7 274 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 NUP93Q8N1F7 819 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 TMEM86AQ8N2M4 240 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 MSANTD4Q8NCY6 345 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 OR8H1Q8NGG4 311 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 DUSP19Q8WTR2 217 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 CCDC12Q8WUD4 166 aaPredicted RBP5.37□□□□□ -1.55
RTF1-204ENST00000558117 FAM149B1Q96BN6 582 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 RHBDF1Q96CC6 855 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 GRAMD2BQ96HH9 432 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 IFT74Q96LB3 600 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 JAKMIP1Q96N16 626 aaKnown RBP5.37□□□□□ -1.55
RTF1-204ENST00000558117 SH3GL2Q99962 352 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 EDEM3Q9BZQ6 932 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 NACA2Q9H009 215 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 SEBOXQ9HB31 216 aaPredicted RBP5.37□□□□□ -1.55
RTF1-204ENST00000558117 ABCB8Q9NUT2 735 aa5.37□□□□□ -1.55
RTF1-204ENST00000558117 APOBEC3BQ9UH17 382 aaKnown RBP5.37□□□□□ -1.55
RTF1-204ENST00000558117 LIMA1Q9UHB6 759 aaKnown RBP5.37□□□□□ -1.55
RTF1-204ENST00000558117 MDC1Q14676 2089 aaKnown RBP5.36□□□□□ -1.55
RTF1-204ENST00000558117 A0A0G2JPF8 293 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 A0A0U1RQS6 177 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 C1orf226A1L170 272 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 FRMD3A2A2Y4 597 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 ARGFXA6NJG6 315 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 HNRNPCL3B7ZW38 293 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 UBE2CO00762 179 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 B4GAT1O43505 415 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 HNRNPCL1O60812 293 aaKnown RBP5.36□□□□□ -1.55
RTF1-204ENST00000558117 KRT36O76013 467 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 HNRNPCL4P0DMR1 293 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 LMO2P25791 158 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 SPAM1P38567 509 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 NNMTP40261 264 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 VAMP7P51809 220 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 LIMK2P53671 638 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 SLC20A2Q08357 652 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 GOLGA8DPQ0D2H9 430 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 EPS8Q12929 822 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 CSTF3Q12996 717 aaKnown RBP5.36□□□□□ -1.55
RTF1-204ENST00000558117 STK4Q13043 487 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 TRA2AQ13595 282 aaKnown RBP eCLIP5.36□□□□□ -1.55
RTF1-204ENST00000558117 TMEM132DQ14C87 1099 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 FAM76BQ5HYJ3 339 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 TTI2Q6NXR4 508 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 ZNF449Q6P9G9 518 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 KCTD18Q6PI47 426 aaPredicted RBP5.36□□□□□ -1.55
RTF1-204ENST00000558117 C16orf47Q6ZP98 133 aaPredicted RBP5.36□□□□□ -1.55
RTF1-204ENST00000558117 Q6ZTC4 211 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 DPPA4Q7L190 304 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 CEP57L1Q8IYX8 460 aa5.36□□□□□ -1.55
RTF1-204ENST00000558117 BEST3Q8N1M1 668 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms