RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 CDCP1Q9H5V8 836 aa12.66□□□□□ -0.38
ALPK3-202ENST00000558077 PNO1Q9NRX1 252 aaKnown RBP12.66□□□□□ -0.38
ALPK3-202ENST00000558077 MRPS33Q9Y291 106 aaKnown RBP12.66□□□□□ -0.38
ALPK3-202ENST00000558077 COL12A1Q99715 3063 aa12.66□□□□□ -0.38
ALPK3-202ENST00000558077 TRAV17A0A0B4J275 112 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 SMIM23A6NLE4 172 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 UBFD1O14562 309 aaKnown RBP12.65□□□□□ -0.38
ALPK3-202ENST00000558077 PLIN3O60664 434 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 CDH16O75309 829 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 GLRA3O75311 464 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 WISP2O76076 250 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 MYO1DO94832 1006 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 SUPT7LO94864 414 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 DDAH2O95865 285 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 OTCP00480 354 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 PDYNP01213 254 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 TAC1P20366 129 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 CPN2P22792 545 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 TPP2P29144 1249 aaPredicted RBP12.65□□□□□ -0.38
ALPK3-202ENST00000558077 RAP1GDS1P52306 607 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 TNFRSF17Q02223 184 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 GALNT1Q10472 559 aaPredicted RBP12.65□□□□□ -0.38
ALPK3-202ENST00000558077 MRPL49Q13405 166 aaKnown RBP12.65□□□□□ -0.38
ALPK3-202ENST00000558077 RCN2Q14257 317 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 ELAVL1Q15717 326 aaKnown RBP12.65□□□□□ -0.38
ALPK3-202ENST00000558077 ERCC6LQ2NKX8 1250 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 SGO1Q5FBB7 561 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 ZYG11AQ6WRX3 759 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 ATCAYQ86WG3 371 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 OR4N5Q8IXE1 308 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 CNPY4Q8N129 248 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 METTL4Q8N3J2 472 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 ZNF321PQ8N8H1 164 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 GRHL3Q8TE85 626 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 CAVIN3Q969G5 261 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 ZNF382Q96SR6 550 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 TRIM45Q9H8W5 580 aaPredicted RBP12.65□□□□□ -0.38
ALPK3-202ENST00000558077 ADAP2Q9NPF8 381 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 TRPS1Q9UHF7 1281 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 EML6Q6ZMW3 1958 aa12.65□□□□□ -0.38
ALPK3-202ENST00000558077 USP9YO00507 2555 aaPredicted RBP12.64□□□□□ -0.39
ALPK3-202ENST00000558077 BLACEA4D250 179 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 GABRR3A8MPY1 467 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 MANBAO00462 879 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 PRAMEF2O60811 474 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 VPS4BO75351 444 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 NEURL1O76050 574 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 GBAP04062 536 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 FAM58BPP0C7Q3 252 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 CHN1P15882 459 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 PHEXP78562 749 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 TBL3Q12788 808 aaKnown RBP12.64□□□□□ -0.39
ALPK3-202ENST00000558077 NR6A1Q15406 480 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 C10orf62Q5T681 223 aaPredicted RBP12.64□□□□□ -0.39
ALPK3-202ENST00000558077 SLC22A9Q8IVM8 553 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 SLC5A8Q8N695 610 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 FAR1Q8WVX9 515 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 NCLNQ969V3 563 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 SCMH1Q96GD3 660 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 SLX1AQ9BQ83 275 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 MRPL1Q9BYD6 325 aaKnown RBP12.64□□□□□ -0.39
ALPK3-202ENST00000558077 HES7Q9BYE0 225 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 PARD6BQ9BYG5 372 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 RPF2Q9H7B2 306 aaKnown RBP12.64□□□□□ -0.39
ALPK3-202ENST00000558077 MS4A12Q9NXJ0 267 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 ANKRD10Q9NXR5 420 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 LGALS13Q9UHV8 139 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 PHF11Q9UIL8 331 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 VPS4AQ9UN37 437 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 CROCCQ5TZA2 2017 aa12.64□□□□□ -0.39
ALPK3-202ENST00000558077 TRBV11-1A0A0K0K1C0 115 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 A0A1W2PS29 197 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 AIFM1O95831 613 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 KRT15P19012 456 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 KRT4P19013 534 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 TRHRP34981 398 aaPredicted RBP12.63□□□□□ -0.39
ALPK3-202ENST00000558077 ARL1P40616 181 aaPredicted RBP12.63□□□□□ -0.39
ALPK3-202ENST00000558077 HTR6P50406 440 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 CLCN2P51788 898 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 TDGF1P3P51864 188 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 TAS2R50P59544 299 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 FOLH1Q04609 750 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 SRSF11Q05519 484 aaKnown RBP12.63□□□□□ -0.39
ALPK3-202ENST00000558077 IFT88Q13099 833 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 SERTAD2Q14140 314 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 SPINK14Q6IE38 97 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 EMBQ6PCB8 327 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 C16orf47Q6ZP98 133 aaPredicted RBP12.63□□□□□ -0.39
ALPK3-202ENST00000558077 TRABD2AQ86V40 505 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 NUDT13Q86X67 352 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 C4orf33Q8N1A6 199 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 TMEM132CQ8N3T6 1108 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 MREGQ8N565 214 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 CDYL2Q8N8U2 506 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 MORN4Q8NDC4 146 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 ZNF721Q8TF20 911 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 SELENOMQ8WWX9 145 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 TANKQ92844 425 aa12.63□□□□□ -0.39
ALPK3-202ENST00000558077 VMP1Q96GC9 406 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms