RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TBCCQ15814 346 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 PDK4Q16654 411 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 PIGGQ5H8A4 983 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 ZNF585AQ6P3V2 769 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 FAM47EQ6ZV65 393 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 ACOT4Q8N9L9 421 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 SNX31Q8N9S9 440 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 SRFBP1Q8NEF9 429 aaKnown RBP14.75□□□□□ -0.05
SCFD1-224ENST00000557713 ZNF721Q8TF20 911 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 ANKRD9Q96BM1 317 aaPredicted RBP14.75□□□□□ -0.05
SCFD1-224ENST00000557713 ZNF559Q9BR84 538 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 TBCDQ9BTW9 1192 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 MS4A8Q9BY19 250 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 ROGDIQ9GZN7 287 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 SEMA4BQ9NPR2 832 aaPredicted RBP14.75□□□□□ -0.05
SCFD1-224ENST00000557713 SACM1LQ9NTJ5 587 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 PHF3Q92576 2039 aaKnown RBP14.75□□□□□ -0.05
SCFD1-224ENST00000557713 MED13LQ71F56 2210 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 ZFHX3Q15911 3703 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 CXorf49A8MYA2 514 aaPredicted RBP14.74□□□□□ -0.05
SCFD1-224ENST00000557713 RTCAO00442 366 aaKnown RBP14.74□□□□□ -0.05
SCFD1-224ENST00000557713 AQP7O14520 342 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 SUSD5O60279 629 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 SCELO95171 688 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 CELA3AP09093 270 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 CCL3P10147 92 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 CD1EP15812 388 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 DNASE1L1P49184 302 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 ATP6V0D1P61421 351 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 IGLV3-21P80748 117 aaPredicted RBP14.74□□□□□ -0.05
SCFD1-224ENST00000557713 CHIT1Q13231 466 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 SLC10A1Q14973 349 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 HIST2H2ACQ16777 129 aaPredicted RBP14.74□□□□□ -0.05
SCFD1-224ENST00000557713 MPEG1Q2M385 716 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 CES4AQ5XG92 561 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 HIST2H2AA3Q6FI13 130 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 B3GNT6Q6ZMB0 384 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 LIX1LQ8IVB5 337 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 ZBED8Q8IZ13 594 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 CLYBLQ8N0X4 340 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 PDPRQ8NCN5 879 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 OR10Q1Q8NGQ4 319 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 ZNF473Q8WTR7 871 aaKnown RBP14.74□□□□□ -0.05
SCFD1-224ENST00000557713 TSPAN17Q96FV3 270 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 UBXN10Q96LJ8 280 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 TRIM31Q9BZY9 425 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 SLC24A3Q9HC58 644 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 TRMT1Q9NXH9 659 aaKnown RBP14.74□□□□□ -0.05
SCFD1-224ENST00000557713 TUBA8Q9NY65 449 aaPredicted RBP14.74□□□□□ -0.05
SCFD1-224ENST00000557713 ATG4BQ9Y4P1 393 aa14.74□□□□□ -0.05
SCFD1-224ENST00000557713 ZNF407Q9C0G0 2248 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 A0A0G2JNJ9 132 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 ATP6AP2A0A1C7CYW4 349 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 FIGNL2A6NMB9 653 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 PHGDHO43175 533 aaKnown RBP14.73□□□□□ -0.05
SCFD1-224ENST00000557713 ATP6AP2O75787 350 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 IGKV3-11P04433 115 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 P04436 131 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 MSH2P43246 934 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 RPL21P46778 160 aaKnown RBP14.73□□□□□ -0.05
SCFD1-224ENST00000557713 ZFP36L2P47974 494 aaKnown RBP14.73□□□□□ -0.05
SCFD1-224ENST00000557713 DLX5P56178 289 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 ID2Q02363 134 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 IRF8Q02556 426 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 ASPHQ12797 758 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 ZNF791Q3KP31 576 aaPredicted RBP14.73□□□□□ -0.05
SCFD1-224ENST00000557713 TMEM35AQ53FP2 167 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 PAGE2BQ5JRK9 111 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 ADGRD1Q6QNK2 874 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 LAS2Q8IYD9 372 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 C7orf57Q8NEG2 295 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 SENP5Q96HI0 755 aaPredicted RBP14.73□□□□□ -0.05
SCFD1-224ENST00000557713 GPR22Q99680 433 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 CD244Q9BZW8 370 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 SH2D2AQ9NP31 389 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 CD274Q9NZQ7 290 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 Q9UFV3 132 aa14.73□□□□□ -0.05
SCFD1-224ENST00000557713 EFCAB8A8MWE9 144 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 FGF17O60258 216 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 CCNT2O60583 730 aaKnown RBP14.72□□□□□ -0.05
SCFD1-224ENST00000557713 WDR1O75083 606 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 KRT38O76015 456 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 TGFB1P01137 390 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 STMN1P16949 149 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 HIST1H1TP22492 207 aaPredicted RBP14.72□□□□□ -0.05
SCFD1-224ENST00000557713 SSTR1P30872 391 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 DNAJA1P31689 397 aaKnown RBP14.72□□□□□ -0.05
SCFD1-224ENST00000557713 PIGAP37287 484 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 ADH7P40394 386 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 STT3AP46977 705 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 MAN2A2P49641 1150 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 ART1P52961 327 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 PCDH1Q08174 1060 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 AP5B1Q2VPB7 878 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 LYPD8Q6UX82 237 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 DGAT2L6Q6ZPD8 337 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 CAPN12Q6ZSI9 719 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 TMEM200AQ86VY9 491 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 OR4N5Q8IXE1 308 aa14.72□□□□□ -0.05
SCFD1-224ENST00000557713 NUBPLQ8TB37 319 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms