RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 GOLGA8QA0A0J9YX86 632 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 SH3PXD2BA1X283 911 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 GOLGA8OA6NCC3 632 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 C2orf74A8MZ97 194 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 TMEM114B3SHH9 223 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 GOLGA8NF8WBI6 632 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 GOLGA8RI6L899 631 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ASNA1O43681 348 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 KLK8O60259 260 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 CLEC3AO75596 197 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 TRMUO75648 421 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 POP7O75817 140 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 BMP10O95393 424 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 SERPINA7P05543 415 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 RBP3P10745 1247 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 PVRP15151 417 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ZFXP17010 805 aaPredicted RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF23P17027 643 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 PEX2P28328 305 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 TPP2P29144 1249 aaPredicted RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 TTKP33981 857 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 NSG1P42857 185 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 CPA2P48052 419 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 RAB28P51157 221 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF143P52747 638 aaPredicted RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 PRKAA2P54646 552 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 CDH6P55285 790 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 RPL7AP62424 266 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 NKX6-1P78426 367 aaPredicted RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 TXNL4AP83876 142 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 TMEM115Q12893 351 aaPredicted RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 FRG1Q14331 258 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 NFE2L1Q14494 772 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 KRT33BQ14525 404 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 CYP27C1Q4G0S4 372 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ATP13A4Q4VNC1 1196 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 TEDDM1Q5T9Z0 273 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ABHD17BQ5VST6 288 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 CNSTQ6PJW8 725 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 Q6ZNX1 250 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 SHISA6Q6ZSJ9 500 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 FAM214BQ7L5A3 538 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ZZZ3Q8IYH5 903 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ATPAF2Q8N5M1 289 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 CPSF7Q8N684 471 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ZBTB8BQ8NAP8 495 aaPredicted RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 GPR26Q8NDV2 337 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 GSDMBQ8TAX9 411 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 HM13Q8TCT9 377 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 BRSK1Q8TDC3 778 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 SLC26A7Q8TE54 656 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 LCN9Q8WX39 176 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 RND1Q92730 232 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 HDAC10Q969S8 669 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 NMD3Q96D46 503 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 DUS3LQ96G46 650 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 DCUN1D1Q96GG9 259 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 CLPTM1LQ96KA5 538 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 MCEEQ96PE7 176 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 FAM118BQ9BPY3 351 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 NAT9Q9BTE0 207 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 PIF1Q9H611 641 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 PALMDQ9NP74 551 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 NT5MQ9NPB1 228 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 SLC22A11Q9NSA0 550 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 NFKBIL1Q9UBC1 381 aaPredicted RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 RIMS3Q9UJD0 308 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 MID2Q9UJV3 735 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 PTBP2Q9UKA9 531 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 RNF6Q9Y252 685 aa6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 SNRNP200O75643 2136 aaKnown RBP6.43□□□□□ -1.38
SPTLC2-206ENST00000557566 ARID1AO14497 2285 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PRSS51A0A1B0GVH4 220 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 A0A1B0GX78 115 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 TCRBV7S3A2A0A539 114 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 CCDC162PA2VCL2 907 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 SLCO1B7G3V0H7 640 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 GOLGA8MH3BSY2 632 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 H7C1Q1 480 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 BTN3A1O00481 513 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ZNF195O14628 629 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ARHGEF9O43307 516 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PLIN3O60664 434 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 MAFKO60675 156 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 CRLF1O75462 422 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PRLP01236 227 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 TPOP07202 933 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 SLC35G4P0C7Q5 338 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 COX4I1P13073 169 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 PSMA2P25787 234 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 EEF1DP29692 281 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 SERPINB6P35237 376 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 GJC1P36383 396 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 SLC1A6P48664 564 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ARSFP54793 590 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 ALDH18A1P54886 795 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 RNF4P78317 190 aa6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 BASP1P80723 227 aaKnown RBP6.42□□□□□ -1.38
SPTLC2-206ENST00000557566 SLC25A3Q00325 362 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms