RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TRA2AQ13595 282 aaKnown RBP eCLIP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 DOC2AQ14183 400 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 SQLEQ14534 574 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 NCF4Q15080 339 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 RPS6KA1Q15418 735 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 IZUMO4Q1ZYL8 232 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 LACTB2Q53H82 288 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ODF2Q5BJF6 829 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 NHSL2Q5HYW2 709 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ZNF658Q5TYW1 1059 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 IYDQ6PHW0 289 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 SLC25A47Q6Q0C1 308 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 NLRP9Q7RTR0 991 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 COX8CQ7Z4L0 72 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 DZIP1Q86YF9 867 aaKnown RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 TMEM139Q8IV31 216 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 C10orf67Q8IYJ2 551 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 SLC38A6Q8IZM9 456 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 GPC2Q8N158 579 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 TMCO5AQ8N6Q1 288 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 STPG4Q8N801 248 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CNBD1Q8NA66 436 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 NHLRC2Q8NBF2 726 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 PRSS33Q8NF86 280 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 OR5T2Q8NGG2 359 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 OR13A1Q8NGR1 328 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CDC26Q8NHZ8 85 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 SLC22A8Q8TCC7 542 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 AGR3Q8TD06 166 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 NT5C3BQ969T7 300 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 RAB7BQ96AH8 199 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MSANTD3Q96H12 275 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 SENP5Q96HI0 755 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ART5Q96L15 291 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 NDNQ99608 321 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 DDX50Q9BQ39 737 aaKnown RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 LSG1Q9H089 658 aaKnown RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ATP13A3Q9H7F0 1226 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MTHFD2LQ9H903 347 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 VIPAS39Q9H9C1 493 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 TBC1D17Q9HA65 648 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 A4GALTQ9NPC4 353 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 POLE3Q9NRF9 147 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ECHDC1Q9NTX5 307 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 DAPK2Q9UIK4 370 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 TMCO1Q9UM00 188 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 WDR97A6NE52 1622 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ROCK1Q13464 1354 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CCNB3Q8WWL7 1395 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 WNK3Q9BYP7 1800 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 XKRY2A2RUG3 117 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 LRRD1A4D1F6 860 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MTMR11A4FU01 709 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 GOLGA6L4A6NEF3 574 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 C17orf105B2RV13 164 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 NR5A2O00482 541 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ANGPT2O15123 496 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 TXNL1O43396 289 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 PRAF2O60831 178 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 HLA-DRAP01903 254 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 RAF1P04049 648 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 GLAP06280 429 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 PRSS1P07477 247 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 FGF4P08620 206 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CCNA2P20248 432 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 IL32P24001 234 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 PTPN4P29074 926 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 TRIM23P36406 574 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CCT6AP40227 531 aaKnown RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 EIF3EP60228 445 aaKnown RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 NOP14P78316 857 aaKnown RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 OTUD4Q01804 1114 aaKnown RBP1.51□□□□□ -2.17
HIF1A-212ENST00000557538 RASGEF1BQ0VAM2 473 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CHIT1Q13231 466 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MAB21L1Q13394 359 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 PTK6Q13882 451 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 OPCMLQ14982 345 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ARHGAP19Q14CB8 494 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 HSDL1Q3SXM5 330 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC153Q494R4 210 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 GPR33Q49SQ1 333 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 KLHL22Q53GT1 634 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CCNJQ5T5M9 372 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 PDPK2PQ6A1A2 396 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 SLC25A24Q6NUK1 477 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CD164L2Q6UWJ8 174 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 FAM228AQ86W67 206 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC36Q8IYA8 594 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CSGALNACT2Q8N6G5 542 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 WDSUB1Q8N9V3 476 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 SPC24Q8NBT2 197 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ENKURQ8TC29 256 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 ADAMTS16Q8TE57 1224 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 MAIP1Q8WWC4 291 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 KCNE4Q8WWG9 221 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 RAD51AP1Q96B01 352 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 TUBGCP3Q96CW5 907 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 CABS1Q96KC9 395 aa1.51□□□□□ -2.17
HIF1A-212ENST00000557538 AK8Q96MA6 479 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms