RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 INPP5JQ15735 1006 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-217ENST00000556203 KRT71Q3SY84 523 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 ACER2Q5QJU3 275 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 H3F3CQ6NXT2 135 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 CRLF3Q8IUI8 442 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 C10orf107Q8IVU9 208 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 OR4N5Q8IXE1 308 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 IQCKQ8N0W5 287 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 BEST3Q8N1M1 668 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 SLC5A8Q8N695 610 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 B3GNT7Q8NFL0 401 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 METTL6Q8TCB7 284 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 AGAP11Q8TF27 550 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 HAS2Q92819 552 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 MIB2Q96AX9 1013 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 ANKRD9Q96BM1 317 aaPredicted RBP14.2□□□□□ -0.14
ACTN1-217ENST00000556203 ZNF354BQ96LW1 612 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 SMC6Q96SB8 1091 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 NPAS2Q99743 824 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 RPF2Q9H7B2 306 aaKnown RBP14.2□□□□□ -0.14
ACTN1-217ENST00000556203 BRF2Q9HAW0 419 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 MID1IP1Q9NPA3 183 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 ADAP2Q9NPF8 381 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 OXSMQ9NWU1 459 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 MAP10Q9P2G4 905 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 ASB4Q9Y574 426 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 PCDHGA10Q9Y5H3 936 aa14.2□□□□□ -0.14
ACTN1-217ENST00000556203 CFAP46Q8IYW2 2715 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 A0A1W2PR48 441 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 ARHGAP10A1A4S6 786 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 UBFD1O14562 309 aaKnown RBP14.19□□□□□ -0.14
ACTN1-217ENST00000556203 ULK1O75385 1050 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 SPAG7O75391 227 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 NR2F6P10588 404 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 HTR6P50406 440 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 NAA20P61599 178 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 PCLAFQ15004 111 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 ELAVL1Q15717 326 aaKnown RBP14.19□□□□□ -0.14
ACTN1-217ENST00000556203 MEP1AQ16819 746 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 LIPMQ5VYY2 423 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 FRMD7Q6ZUT3 714 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 PAGE2Q7Z2X7 111 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 COMMD6Q7Z4G1 85 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 METTL4Q8N3J2 472 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 CISD2Q8N5K1 135 aaKnown RBP14.19□□□□□ -0.14
ACTN1-217ENST00000556203 TANKQ92844 425 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 FAM111AQ96PZ2 611 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 KCNA7Q96RP8 456 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 RNF32Q9H0A6 362 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.19□□□□□ -0.145e-7■■□□□ 12.9
ACTN1-217ENST00000556203 ABI3Q9P2A4 366 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 SLC17A7Q9P2U7 560 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 VTI1BQ9UEU0 232 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 ADAM29Q9UKF5 820 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 TIMM22Q9Y584 194 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 CLCA3PQ9Y6N3 262 aa14.19□□□□□ -0.14
ACTN1-217ENST00000556203 TRBV11-1A0A0K0K1C0 115 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 CCDC151A5D8V7 595 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 GLOD5A6NK44 160 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 AIFM1O95831 613 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 HSD3B1P14060 373 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 CHN1P15882 459 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 CREB1P16220 341 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 TNNI3P19429 210 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 HSD3B2P26439 372 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 TPP2P29144 1249 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-217ENST00000556203 TNFSF10P50591 281 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 CLCN2P51788 898 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 FOXA1P55317 472 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 FOLH1Q04609 750 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 GALNT1Q10472 559 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-217ENST00000556203 TBL3Q12788 808 aaKnown RBP14.18□□□□□ -0.14
ACTN1-217ENST00000556203 CCNYL2Q5T2Q4 361 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 LGI4Q8N135 537 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 TMEM132CQ8N3T6 1108 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 APCDD1LQ8NCL9 501 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 OR1N1Q8NGS0 311 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 TCP10LQ8TDR4 215 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 PTPMT1Q8WUK0 201 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-217ENST00000556203 DAZLQ92904 295 aaKnown RBP14.18□□□□□ -0.14
ACTN1-217ENST00000556203 UCN3Q969E3 161 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 NCLNQ969V3 563 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 SNRNP40Q96DI7 357 aaKnown RBP14.18□□□□□ -0.14
ACTN1-217ENST00000556203 C19orf60Q96EN9 201 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 VMP1Q96GC9 406 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 CDCP1Q9H5V8 836 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 WDR41Q9HAD4 459 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 NMRK1Q9NWW6 199 aa14.18□□□□□ -0.14
ACTN1-217ENST00000556203 PPIEQ9UNP9 301 aaKnown RBP14.18□□□□□ -0.14
ACTN1-217ENST00000556203 TRAV17A0A0B4J275 112 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 OR5H15A6NDH6 313 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 WASHC1A8K0Z3 465 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 GABRR3A8MPY1 467 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 C17orf105B2RV13 164 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 RGS16O15492 202 aaPredicted RBP14.17□□□□□ -0.14
ACTN1-217ENST00000556203 TRIM13O60858 407 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 CRCPO75575 148 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 ALDH3A1P30838 453 aa14.17□□□□□ -0.14
ACTN1-217ENST00000556203 ST13P50502 369 aaKnown RBP14.17□□□□□ -0.14
ACTN1-217ENST00000556203 GPR143P51810 404 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms