RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 VIPP01282 170 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 CXCL10P02778 98 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 SOD2P04179 222 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ALPPP05187 535 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ETFAP13804 333 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 SPNP16150 400 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 CPEP16870 476 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ZNF8P17098 575 aaPredicted RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 GALP22466 123 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 UQCRC2P22695 453 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 CFL1P23528 166 aaKnown RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ITPKAP23677 461 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 PSMA1P25786 263 aaKnown RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 MSX1P28360 303 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 IMPA1P29218 277 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TNFSF8P32971 234 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TGFBR1P36897 503 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 FRKP42685 505 aaPredicted RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TM4SF4P48230 202 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 SEPHS1P49903 392 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 RORCP51449 518 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 EPHB3P54753 998 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 CDH12P55289 794 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 DSTNP60981 165 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 WDR5P61964 334 aaKnown RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 HBA1P69905 142 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 RUNX1T1Q06455 604 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 MLC1Q15049 377 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 CDK10Q15131 360 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 SPHARQ15513 63 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ZNF79Q15937 498 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TAF12Q16514 161 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TSTQ16762 297 aaKnown RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TMEM44Q2T9K0 475 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 GLYR1Q49A26 553 aaPredicted RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ZFP69Q49AA0 526 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ZNF385BQ569K4 471 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 C3orf38Q5JPI3 329 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ATAD3CQ5T2N8 411 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 MFSD4BQ5TF39 518 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 CST9Q5W186 159 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 SAXO2Q658L1 398 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 REEP3Q6NUK4 255 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 RGMBQ6NW40 437 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 CD200R1LQ6Q8B3 271 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 KLHL17Q6TDP4 642 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 METAP1DQ6UB28 335 aaPredicted RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 HSDL2Q6YN16 418 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 LRRC69Q6ZNQ3 347 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 CCDC149Q6ZUS6 474 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ZNF765Q7L2R6 523 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 COMMD6Q7Z4G1 85 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 MRGPREQ86SM8 312 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 GALNT10Q86SR1 603 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TMEM173Q86WV6 379 aaPredicted RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 RAB43Q86YS6 212 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 VRK3Q8IV63 474 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 BBS7Q8IWZ6 715 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 SYTL1Q8IYJ3 562 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 NRSN1Q8IZ57 195 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TCTE3Q8IZS6 198 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 RDH10Q8IZV5 341 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 APCDD1Q8J025 514 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 NANOGP1Q8N7R0 232 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ASCC1Q8N9N2 400 aaKnown RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 AQP11Q8NBQ7 271 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 PLA2G15Q8NCC3 412 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 HUS1BQ8NHY5 278 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ELMO1Q92556 727 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 AP3S1Q92572 193 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 UBE2FQ969M7 185 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TRIM63Q969Q1 353 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 SLC25A46Q96AG3 418 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TMEM159Q96B96 161 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 MTFMTQ96DP5 389 aaKnown RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 NEURL3Q96EH8 262 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TMEM80Q96HE8 168 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 IGSF21Q96ID5 467 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ST6GAL2Q96JF0 529 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 RIPOR3Q96MK2 946 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 FOPNLQ96NB1 174 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 OR4K3Q96R72 315 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 MTERF1Q99551 399 aaKnown RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 MYOCQ99972 504 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 GDF15Q99988 308 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 TCF25Q9BQ70 676 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 CHCHD6Q9BRQ6 235 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 VN1R3Q9BXE9 311 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ASPNQ9BXN1 380 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 POLDIP3Q9BY77 421 aaKnown RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 UCK2Q9BZX2 261 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 ZCCHC2Q9C0B9 1178 aaKnown RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 PITHD1Q9GZP4 211 aaPredicted RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 SLC22A4Q9H015 551 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 NIPAL2Q9H841 368 aa5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 NMNAT1Q9HAN9 279 aaPredicted RBP5.01□□□□□ -1.61
TMEM55B-204ENST00000553602 RLIMQ9NVW2 624 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms