RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CERS1P27544 350 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 PGGT1BP53609 377 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 KCNJ2P63252 427 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 ADAM8P78325 824 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 ADPRMQ3LIE5 342 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 SLCO4C1Q6ZQN7 724 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 LIX1Q8N485 282 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 NKAPQ8N5F7 415 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 RNASE6Q93091 150 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 CSF3RQ99062 836 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 NAP1L3Q99457 506 aaPredicted RBP13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 CAPS2Q9BXY5 557 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 NT5DC2Q9H857 520 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 DMRT3Q9NQL9 472 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 SLC17A6Q9P2U8 582 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 SPRR3Q9UBC9 169 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 MTRF1LQ9UGC7 380 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 FOXD3Q9UJU5 478 aaPredicted RBP13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 IKZF3Q9UKT9 509 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 SPACA6W5XKT8 324 aa13.1□□□□□ -0.31
CHMP1A-210ENST00000551981 FBN3Q75N90 2809 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 CDC7O00311 574 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 DYRK3O43781 588 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 ZNF37AP17032 561 aaPredicted RBP13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 BMP5P22003 454 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 PIGAP37287 484 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 KEAP1Q14145 624 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 CYP1B1Q16678 543 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 MPEG1Q2M385 716 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 TEDDM1Q5T9Z0 273 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 RNASEH2BQ5TBB1 312 aaKnown RBP13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 SLC22A10Q63ZE4 541 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 ABHD17CQ6PCB6 329 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 ADAMTSL2Q86TH1 951 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 ULK2Q8IYT8 1036 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 DND1Q8IYX4 353 aaKnown RBP13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 ZNF321PQ8N8H1 164 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 SLC22A8Q8TCC7 542 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 ROGDIQ9GZN7 287 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 ZNF703Q9H7S9 590 aaPredicted RBP13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 LYRM4Q9HD34 91 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 ZFP64Q9NPA5 681 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 SEMA4BQ9NPR2 832 aaPredicted RBP13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 GPRC5BQ9NZH0 403 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 CBLCQ9ULV8 474 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 OARD1Q9Y530 152 aa13.09□□□□□ -0.31
CHMP1A-210ENST00000551981 A0A1B0GTL3 188 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 MYOCOSA0A1B0GUC4 107 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 ZNF354AO60765 605 aaPredicted RBP13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 SLC6A12P48065 614 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 KCNC1P48547 511 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 LTBQ06643 244 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 ASPHQ12797 758 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 DAZAP2Q15038 168 aaPredicted RBP13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 PPP1R7Q15435 360 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 DEFB113Q30KQ7 82 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 FBXL19-AS1Q494R0 122 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 PIGGQ5H8A4 983 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 MAATS1Q7Z4T9 603 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 RASGEF1CQ8N431 466 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 RELL2Q8NC24 303 aaPredicted RBP13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 NUBPLQ8TB37 319 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 PBKQ96KB5 322 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 KCNC2Q96PR1 638 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 SH3GL2Q99962 352 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 EHD1Q9H4M9 534 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 ACKR4Q9NPB9 350 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 QPCTLQ9NXS2 382 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 CTNNAL1Q9UBT7 734 aa13.08□□□□□ -0.32
CHMP1A-210ENST00000551981 NCKAP5O14513 1909 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 GOLGA6L10A0A0M3HER8 536 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 CLGNO14967 610 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 LDB3O75112 727 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 BANF1O75531 89 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 ATE1O95260 518 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 TACR1P25103 407 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 GDF5P43026 501 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 FNTAP49354 379 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 SF3B4Q15427 424 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■■■□□ 17.6
CHMP1A-210ENST00000551981 ZNF791Q3KP31 576 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 KIF18BQ86Y91 864 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 LACC1Q8IV20 430 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 LRRC25Q8N386 305 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 SLC15A4Q8N697 577 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 SRFBP1Q8NEF9 429 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 NEIL3Q8TAT5 605 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 PAQR8Q8TEZ7 354 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 ZNF721Q8TF20 911 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 RHBDF1Q96CC6 855 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 SPACA9Q96E40 222 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 CFAP36Q96G28 342 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 MS4A14Q96JA4 679 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 C18orf12Q96KH6 178 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 CNOT10Q9H9A5 744 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 PRM3Q9NNZ6 103 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 SH2D2AQ9NP31 389 aa13.07□□□□□ -0.32
CHMP1A-210ENST00000551981 RYDENQ9NUL5 291 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms