RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 HCFC2Q9Y5Z7 792 aa14.99□□□□□ -0.01
CUX1-211ENST00000546411 SAGE2PA6NJ88 616 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 H7C0S8 307 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 ZDHHC11BP0C7U3 371 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 PIGAP37287 484 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 OPRL1P41146 370 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 SLC14A2Q15849 920 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 LHFPL3Q86UP9 236 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 OR5D16Q8NGK9 328 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 GAL3ST1Q99999 423 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 MAPKAP1Q9BPZ7 522 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 IL1RAPQ9NPH3 570 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 GRXCR1A8MXD5 290 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 M0R3H8 397 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 B4GALT2O60909 372 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 TIMP1P01033 207 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 CRHBPP24387 322 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 FADDQ13158 208 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 ADNP2Q6IQ32 1131 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 WDR53Q7Z5U6 358 aaPredicted RBP14.98□□□□□ -0.01
CUX1-211ENST00000546411 RANBP3LQ86VV4 465 aaPredicted RBP14.98□□□□□ -0.01
CUX1-211ENST00000546411 TTLQ8NG68 377 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 ZFP3Q96NJ6 502 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 COQ7Q99807 217 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 P2RY12Q9H244 342 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 NINQ8N4C6 2090 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 CSF2P04141 144 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 DLEU7Q6UYE1 221 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 SHFQ7M4L6 423 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 GPR149Q86SP6 731 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 ATP6V1C2Q8NEY4 427 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 OR4C6Q8NH72 309 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 RPL3LQ92901 407 aaKnown RBP14.98□□□□□ -0.01
CUX1-211ENST00000546411 PMEPA1Q969W9 287 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 MRPL48Q96GC5 212 aaKnown RBP14.98□□□□□ -0.01
CUX1-211ENST00000546411 SLC6A16Q9GZN6 736 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 MCUBQ9NWR8 336 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 CALML5Q9NZT1 146 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 HS3ST2Q9Y278 367 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 GPR52Q9Y2T5 361 aa14.98□□□□□ -0.01
CUX1-211ENST00000546411 KLHL33A6NCF5 533 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 RIIAD1A6NNX1 92 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 J3KTA2 159 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 XKR7Q5GH72 579 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 LHX8Q68G74 356 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 ARL9Q6T311 187 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 TSPYL5Q86VY4 417 aaPredicted RBP14.97□□□□□ -0.01
CUX1-211ENST00000546411 ZSWIM9Q86XI8 627 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 ZNF761Q86XN6 746 aaPredicted RBP14.97□□□□□ -0.01
CUX1-211ENST00000546411 NLGN4XQ8N0W4 816 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 DTX3Q8N9I9 347 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 NDNFQ8TB73 568 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 SNX33Q8WV41 574 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 RFKQ969G6 155 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 MAGIXQ9H6Y5 334 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 ABCD2Q9UBJ2 740 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 SH3PXD2BA1X283 911 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 CDH11P55287 796 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 CXXC5Q7LFL8 322 aaKnown RBP14.97□□□□□ -0.01
CUX1-211ENST00000546411 RAB43Q86YS6 212 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 OR52N2Q8NGI0 321 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 OR5P2Q8WZ92 322 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 TSACCQ96A04 125 aaPredicted RBP14.97□□□□□ -0.01
CUX1-211ENST00000546411 IMPA1P29218 277 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 SIM1P81133 766 aaPredicted RBP14.97□□□□□ -0.01
CUX1-211ENST00000546411 EMX1Q04741 257 aaPredicted RBP14.97□□□□□ -0.01
CUX1-211ENST00000546411 SCN1BQ07699 218 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 IDNKQ5T6J7 187 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 FATE1Q969F0 183 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 SLC2A11Q9BYW1 496 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 CPEB1Q9BZB8 566 aaKnown RBP14.97□□□□□ -0.01
CUX1-211ENST00000546411 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 DAPL1A0PJW8 107 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 CELP19835 753 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 GADD45AP24522 165 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 NDUFAF5Q5TEU4 345 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 METTL27Q8N6F8 245 aaPredicted RBP14.97□□□□□ -0.01
CUX1-211ENST00000546411 UFD1Q92890 307 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 MCHR1Q99705 422 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 CUEDC1Q9NWM3 386 aaPredicted RBP14.97□□□□□ -0.01
CUX1-211ENST00000546411 ZNF222Q9UK12 451 aa14.97□□□□□ -0.01
CUX1-211ENST00000546411 TSPAN12O95859 305 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 SMSP52788 366 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 CRISP1P54107 249 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 SELENOWP63302 87 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 HOXC5Q00444 222 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 RBBP4Q09028 425 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 GRSF1Q12849 480 aaKnown RBP eCLIP14.96□□□□□ -0.01
CUX1-211ENST00000546411 RUNX3Q13761 415 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 IHHQ14623 411 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 CST6Q15828 149 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 UGT8Q16880 541 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 KHDRBS2Q5VWX1 349 aaKnown RBP14.96□□□□□ -0.01
CUX1-211ENST00000546411 CEP68Q76N32 757 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 CHCHD4Q8N4Q1 142 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 ISG20Q96AZ6 181 aaKnown RBP14.96□□□□□ -0.01
CUX1-211ENST00000546411 TUBA1CQ9BQE3 449 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 CPPED1Q9BRF8 314 aaPredicted RBP14.96□□□□□ -0.01
CUX1-211ENST00000546411 RAB11FIP5Q9BXF6 653 aa14.96□□□□□ -0.01
CUX1-211ENST00000546411 ASPNQ9BXN1 380 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms