RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RNASET2O00584 256 aaKnown RBP11.33□□□□□ -0.6
CCDC38-202ENST00000546386 PDPK1O15530 556 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 ST6GAL1P15907 406 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 HIST1H1TP22492 207 aaPredicted RBP11.33□□□□□ -0.6
CCDC38-202ENST00000546386 TRPC1P48995 793 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 SEPHS1P49903 392 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 BNIP3Q12983 259 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 SCARB2Q14108 478 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 CYBRD1Q53TN4 286 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 C6orf132Q5T0Z8 1188 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 FCRL6Q6DN72 434 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 ABHD17CQ6PCB6 329 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 PARGQ86W56 976 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 Q8N9G6 341 aaPredicted RBP11.33□□□□□ -0.6
CCDC38-202ENST00000546386 ZDHHC1Q8WTX9 485 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 TFAP2CQ92754 450 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 UBE2E3Q969T4 207 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 TAMM41Q96BW9 452 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 BBS4Q96RK4 519 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 UGT2B28Q9BY64 529 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 SERHL2Q9H4I8 314 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 MVB12BQ9H7P6 319 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 OLAHQ9NV23 265 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 RLIMQ9NVW2 624 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 SIRT5Q9NXA8 310 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 DCHS1Q96JQ0 3298 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 SPTBN2O15020 2390 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 FAM220BPB1ANY3 271 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 SGK494L7N484 410 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 DEAF1O75398 565 aaPredicted RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 APBB3O95704 486 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 CXCR2P25025 360 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 ATP5A1P25705 553 aaKnown RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 SHMT2P34897 504 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 GFERP55789 205 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 MAT1AQ00266 395 aaKnown RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 HEPACAMQ14CZ8 416 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 LPAL2Q16609 132 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 FIGLAQ6QHK4 219 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 RNF165Q6ZSG1 346 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 C6orf120Q7Z4R8 191 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 COMTD1Q86VU5 262 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 TMEM52Q8NDY8 209 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 OR2I1PQ8NGU4 316 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 RELTQ969Z4 430 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 ORAI3Q9BRQ5 295 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 ADNPQ9H2P0 1102 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 LIN28AQ9H9Z2 209 aaKnown RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 TBC1D17Q9HA65 648 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 ZCCHC3Q9NUD5 404 aaKnown RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 ATAD3AQ9NVI7 634 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 AHSPQ9NZD4 102 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 HEMK1Q9Y5R4 338 aaPredicted RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 ALPK2Q86TB3 2170 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 PRAMEF27A3QJZ7 478 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 CLDN24A6NM45 220 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 GPR89AB7ZAQ6 455 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 GPR89BP0CG08 455 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 AGXTP21549 392 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 DCTP40126 519 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 MC3RP41968 323 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 CCT3P49368 545 aaKnown RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 KIAA1024LP59773 190 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 DPY19L1Q2PZI1 675 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 ANXA8L1Q5VT79 327 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 TRIM40Q6P9F5 258 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 ABI3BPQ7Z7G0 1075 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 SERPINA11Q86U17 422 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 CYP4Z1Q86W10 505 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 CHERPQ8IWX8 916 aaKnown RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 SYNPOQ8N3V7 929 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 SLC38A5Q8WUX1 472 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 SCARF2Q96GP6 870 aaPredicted RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 AMBRA1Q9C0C7 1298 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 RIBC2Q9H4K1 309 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 PELI2Q9HAT8 420 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 AMBNQ9NP70 447 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 C1GALT1Q9NS00 363 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 RASSF1Q9NS23 344 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 PDP1Q9P0J1 537 aaPredicted RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 ATP6V1HQ9UI12 483 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 CLCA2Q9UQC9 943 aa11.32□□□□□ -0.6
CCDC38-202ENST00000546386 SAMHD1Q9Y3Z3 626 aaKnown RBP11.32□□□□□ -0.6
CCDC38-202ENST00000546386 SYNDIG1LA6NDD5 238 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 SLC9B1P1A6NJY1 282 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 PTGES3LE9PB15 166 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 H0YGG7 62 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 SCELO95171 688 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 CCNDBP1O95273 360 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 RASAL1O95294 804 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 EEF1B2P24534 225 aaKnown RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 RRM2P31350 389 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 ARF3P61204 181 aaPredicted RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 CDK6Q00534 326 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 MEP1AQ16819 746 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 TTC33Q6PID6 262 aaPredicted RBP11.31□□□□□ -0.6
CCDC38-202ENST00000546386 GATAD2AQ86YP4 633 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 FLVCR1-AS1Q8TAF5 88 aa11.31□□□□□ -0.6
CCDC38-202ENST00000546386 NMD3Q96D46 503 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms