RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 RERGLQ9H628 205 aa15.05■□□□□ -0
LDLR-204ENST00000545707 A3GALT2U3KPV4 340 aa15.05■□□□□ -0
LDLR-204ENST00000545707 H3BN98 237 aa15.04■□□□□ -0
LDLR-204ENST00000545707 B4GALT2O60909 372 aa15.04■□□□□ -0
LDLR-204ENST00000545707 LILRB5O75023 590 aa15.04■□□□□ -0
LDLR-204ENST00000545707 KRT75O95678 551 aa15.04■□□□□ -0
LDLR-204ENST00000545707 IFNA14P01570 189 aa15.04■□□□□ -0
LDLR-204ENST00000545707 PTGER1P34995 402 aa15.04■□□□□ -0
LDLR-204ENST00000545707 LSM11P83369 360 aaKnown RBP eCLIP15.04■□□□□ -0
LDLR-204ENST00000545707 HSPB3Q12988 150 aa15.04■□□□□ -0
LDLR-204ENST00000545707 ZMAT1Q5H9K5 638 aa15.04■□□□□ -0
LDLR-204ENST00000545707 REEP3Q6NUK4 255 aa15.04■□□□□ -0
LDLR-204ENST00000545707 TMIGD1Q6UXZ0 262 aa15.04■□□□□ -0
LDLR-204ENST00000545707 FAM83HQ6ZRV2 1179 aaPredicted RBP15.04■□□□□ -0
LDLR-204ENST00000545707 IQCF1Q8N6M8 205 aa15.04■□□□□ -0
LDLR-204ENST00000545707 SCAIQ8N9R8 606 aa15.04■□□□□ -0
LDLR-204ENST00000545707 OTUB1Q96FW1 271 aaPredicted RBP15.04■□□□□ -0
LDLR-204ENST00000545707 TMEM19Q96HH6 336 aa15.04■□□□□ -0
LDLR-204ENST00000545707 F2RL3Q96RI0 385 aa15.04■□□□□ -0
LDLR-204ENST00000545707 TPK1Q9H3S4 243 aa15.04■□□□□ -0
LDLR-204ENST00000545707 HHATLQ9HCP6 504 aa15.04■□□□□ -0
LDLR-204ENST00000545707 CCDC177Q9NQR7 707 aaPredicted RBP15.04■□□□□ -0
LDLR-204ENST00000545707 FBXL12Q9NXK8 326 aa15.04■□□□□ -0
LDLR-204ENST00000545707 WASHC1A8K0Z3 465 aa15.04■□□□□ -0
LDLR-204ENST00000545707 C5orf58C9J3I9 102 aa15.04■□□□□ -0
LDLR-204ENST00000545707 LOC110117498-PIK3R3F6TDL0 507 aa15.04■□□□□ -0
LDLR-204ENST00000545707 TLR4O00206 839 aa15.04■□□□□ -0
LDLR-204ENST00000545707 ASNA1O43681 348 aa15.04■□□□□ -0
LDLR-204ENST00000545707 OR10H3O60404 316 aa15.04■□□□□ -0
LDLR-204ENST00000545707 MOSPD3O75425 235 aa15.04■□□□□ -0
LDLR-204ENST00000545707 TBX6O95947 436 aaPredicted RBP15.04■□□□□ -0
LDLR-204ENST00000545707 TNFSF8P32971 234 aa15.04■□□□□ -0
LDLR-204ENST00000545707 SOX6P35712 828 aa15.04■□□□□ -0
LDLR-204ENST00000545707 CASP3P42574 277 aa15.04■□□□□ -0
LDLR-204ENST00000545707 PNLIPRP1P54315 467 aa15.04■□□□□ -0
LDLR-204ENST00000545707 RAET1GQ6H3X3 334 aa15.04■□□□□ -0
LDLR-204ENST00000545707 WASH2PQ6VEQ5 465 aa15.04■□□□□ -0
LDLR-204ENST00000545707 LSRQ86X29 649 aaPredicted RBP15.04■□□□□ -0
LDLR-204ENST00000545707 OR8H2Q8N162 312 aa15.04■□□□□ -0
LDLR-204ENST00000545707 OR5AR1Q8NGP9 310 aa15.04■□□□□ -0
LDLR-204ENST00000545707 YME1L1Q96TA2 773 aa15.04■□□□□ -0
LDLR-204ENST00000545707 BARHL1Q9BZE3 327 aa15.04■□□□□ -0
LDLR-204ENST00000545707 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.04■□□□□ -0
LDLR-204ENST00000545707 REV1Q9UBZ9 1251 aa15.04■□□□□ -0
LDLR-204ENST00000545707 A0A0G2JN53 185 aa15.03■□□□□ -0
LDLR-204ENST00000545707 PLPP1O14494 284 aa15.03■□□□□ -0
LDLR-204ENST00000545707 AP3D1O14617 1153 aa15.03■□□□□ -0
LDLR-204ENST00000545707 SPINT1O43278 529 aa15.03■□□□□ -0
LDLR-204ENST00000545707 POP7O75817 140 aaKnown RBP15.03■□□□□ -0
LDLR-204ENST00000545707 PTTG1O95997 202 aa15.03■□□□□ -0
LDLR-204ENST00000545707 PCYT1AP49585 367 aa15.03■□□□□ -0
LDLR-204ENST00000545707 MANFP55145 182 aaKnown RBP15.03■□□□□ -0
LDLR-204ENST00000545707 MADCAM1Q13477 382 aa15.03■□□□□ -0
LDLR-204ENST00000545707 TCTN3Q6NUS6 607 aa15.03■□□□□ -0
LDLR-204ENST00000545707 ERAP2Q6P179 960 aa15.03■□□□□ -0
LDLR-204ENST00000545707 CCDC190Q86UF4 302 aa15.03■□□□□ -0
LDLR-204ENST00000545707 FAM46DQ8NEK8 389 aa15.03■□□□□ -0
LDLR-204ENST00000545707 WDR34Q96EX3 536 aa15.03■□□□□ -0
LDLR-204ENST00000545707 CEP19Q96LK0 163 aa15.03■□□□□ -0
LDLR-204ENST00000545707 ASPNQ9BXN1 380 aa15.03■□□□□ -0
LDLR-204ENST00000545707 TMEM98Q9Y2Y6 226 aa15.03■□□□□ -0
LDLR-204ENST00000545707 ALPK3Q96L96 1907 aa15.03■□□□□ -0
LDLR-204ENST00000545707 GOLGA4Q13439 2230 aaKnown RBP15.03■□□□□ -0
LDLR-204ENST00000545707 DNAH14Q0VDD8 3507 aa15.03■□□□□ -0
LDLR-204ENST00000545707 PLXNA2O75051 1894 aa15.03■□□□□ -0
LDLR-204ENST00000545707 CXorf51AA0A1B0GTR3 108 aa15.03■□□□□ -0
LDLR-204ENST00000545707 FEZF1A0PJY2 475 aa15.03■□□□□ -0
LDLR-204ENST00000545707 HIDE1A8MVS5 230 aa15.03■□□□□ -0
LDLR-204ENST00000545707 MMP20O60882 483 aa15.03■□□□□ -0
LDLR-204ENST00000545707 ACRP10323 421 aa15.03■□□□□ -0
LDLR-204ENST00000545707 TNNI3P19429 210 aa15.03■□□□□ -0
LDLR-204ENST00000545707 UQCRC2P22695 453 aa15.03■□□□□ -0
LDLR-204ENST00000545707 AZGP1P25311 298 aaKnown RBP15.03■□□□□ -0
LDLR-204ENST00000545707 SLC15A1P46059 708 aa15.03■□□□□ -0
LDLR-204ENST00000545707 MXD1Q05195 221 aa15.03■□□□□ -0
LDLR-204ENST00000545707 CNTN1Q12860 1018 aa15.03■□□□□ -0
LDLR-204ENST00000545707 C19orf48Q6RUI8 117 aa15.03■□□□□ -0
LDLR-204ENST00000545707 SZRD1Q7Z422 152 aa15.03■□□□□ -0
LDLR-204ENST00000545707 MEX3DQ86XN8 651 aaKnown RBP15.03■□□□□ -0
LDLR-204ENST00000545707 APOBEC4Q8WW27 367 aaKnown RBP15.03■□□□□ -0
LDLR-204ENST00000545707 CAPSLQ8WWF8 208 aa15.03■□□□□ -0
LDLR-204ENST00000545707 ING5Q8WYH8 240 aa15.03■□□□□ -0
LDLR-204ENST00000545707 DTD2Q96FN9 168 aa15.03■□□□□ -0
LDLR-204ENST00000545707 CAPNS2Q96L46 248 aa15.03■□□□□ -0
LDLR-204ENST00000545707 UCK2Q9BZX2 261 aa15.03■□□□□ -0
LDLR-204ENST00000545707 SNTG1Q9NSN8 517 aa15.03■□□□□ -0
LDLR-204ENST00000545707 ASF1AQ9Y294 204 aa15.03■□□□□ -0
LDLR-204ENST00000545707 PLXND1Q9Y4D7 1925 aa15.03■□□□□ -0
LDLR-204ENST00000545707 DENND4CQ5VZ89 1909 aa15.02■□□□□ -0
LDLR-204ENST00000545707 TSPAN11A1L157 253 aa15.02■□□□□ -0
LDLR-204ENST00000545707 CSO75390 466 aaKnown RBP15.02■□□□□ -0
LDLR-204ENST00000545707 GPR1P46091 355 aa15.02■□□□□ -0
LDLR-204ENST00000545707 TEKQ02763 1124 aa15.02■□□□□ -0
LDLR-204ENST00000545707 ELOAQ14241 798 aaKnown RBP15.02■□□□□ -0
LDLR-204ENST00000545707 BCL7AQ4VC05 210 aa15.02■□□□□ -0
LDLR-204ENST00000545707 SLC39A5Q6ZMH5 540 aa15.02■□□□□ -0
LDLR-204ENST00000545707 SLC9B2Q86UD5 537 aa15.02■□□□□ -0
LDLR-204ENST00000545707 COMTD1Q86VU5 262 aa15.02■□□□□ -0
LDLR-204ENST00000545707 TCEANCQ8N8B7 351 aa15.02■□□□□ -0
LDLR-204ENST00000545707 IL17RDQ8NFM7 739 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms