RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CASP9P55211 416 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 BNC1Q01954 994 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 DEFB134Q4QY38 66 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 PMS2CLQ68D20 193 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 TMEM214Q6NUQ4 689 aaKnown RBP18.76■□□□□ 0.59
COPS7A-218ENST00000543939 GALNT4Q8N4A0 578 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 CSNK1A1LQ8N752 337 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 MAL2Q969L2 176 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 PYURFQ96I23 114 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 SLC29A1Q99808 456 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 ASPSCR1Q9BZE9 553 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 TMEM38AQ9H6F2 299 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 KCMF1Q9P0J7 381 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 SAMD4AQ9UPU9 718 aaKnown RBP18.76■□□□□ 0.59
COPS7A-218ENST00000543939 MRPS2Q9Y399 296 aaKnown RBP18.76■□□□□ 0.59
COPS7A-218ENST00000543939 MAP4K5Q9Y4K4 846 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 PCDH15Q96QU1 1955 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 TECTAO75443 2155 aa18.76■□□□□ 0.59
COPS7A-218ENST00000543939 SAC3D1A6NKF1 404 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 CLOCKO15516 846 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 LAMTOR5O43504 91 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 HCRTR1O43613 425 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 HOXB6P17509 224 aaKnown RBP18.75■□□□□ 0.59
COPS7A-218ENST00000543939 ALOX12P18054 663 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 NTSP30990 170 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 RBBP4Q09028 425 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 SRSF5Q13243 272 aaKnown RBP18.75■□□□□ 0.59
COPS7A-218ENST00000543939 RUNX2Q13950 521 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 LRRC23Q53EV4 343 aaPredicted RBP18.75■□□□□ 0.59
COPS7A-218ENST00000543939 INTS11Q5TA45 600 aaKnown RBP18.75■□□□□ 0.59
COPS7A-218ENST00000543939 PPP4R4Q6NUP7 873 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 IRGCQ6NXR0 463 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 EPHX4Q8IUS5 362 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 SLC25A45Q8N413 288 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 BBS4Q96RK4 519 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 PHF11Q9UIL8 331 aa18.75■□□□□ 0.59
COPS7A-218ENST00000543939 SLC9B1P1A6NJY1 282 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 B3GALT2O43825 422 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 B4GALT2O60909 372 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 ERAL1O75616 437 aaKnown RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 PRSS23O95084 383 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 NR2F6P10588 404 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 ZNF10P21506 573 aaPredicted RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 EPHA4P54764 986 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 VSX2P58304 361 aaPredicted RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 EEF1A2Q05639 463 aaKnown RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 BNIP3Q12983 259 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 SHBQ15464 509 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 C6orf132Q5T0Z8 1188 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 ZBTB49Q6ZSB9 765 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 MAML2Q8IZL2 1156 aaPredicted RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 ZFP28Q8NHY6 868 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 GAB3Q8WWW8 586 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 CNRIP1Q96F85 164 aaPredicted RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 NECAB3Q96P71 396 aaPredicted RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 MAP3K3Q99759 626 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 TMEM74BQ9NUR3 256 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 RPS6KA6Q9UK32 745 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 AK5Q9Y6K8 562 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 DNAH14Q0VDD8 3507 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 CACNA1EQ15878 2313 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 DEAF1O75398 565 aaPredicted RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 GCM2O75603 506 aaPredicted RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 GIMD1P0DJR0 217 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 RXRGP48443 463 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 NCBP2P52298 156 aaKnown RBP eCLIP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 LIM2P55344 173 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 TNFRSF17Q02223 184 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 CEBPEQ15744 281 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 CBLL1Q75N03 491 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 EIF3MQ7L2H7 374 aaKnown RBP18.74■□□□□ 0.59
COPS7A-218ENST00000543939 SPRED1Q7Z699 444 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 GALNT10Q86SR1 603 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 C11orf74Q86VG3 221 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 DNAJC22Q8N4W6 341 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 SUN3Q8TAQ9 357 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 C10orf90Q96M02 699 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 CCDC3Q9BQI4 270 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 BDH2Q9BUT1 245 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 C9orf16Q9BUW7 83 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 RAB33BQ9H082 229 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 NTN4Q9HB63 628 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 OAZ3Q9UMX2 235 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 DAPP1Q9UN19 280 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 ENTPD4Q9Y227 616 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 SLC22A7Q9Y694 548 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 RNF215Q9Y6U7 377 aa18.74■□□□□ 0.59
COPS7A-218ENST00000543939 PI4KAP42356 2102 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 RHPN2P1A8MT19 583 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 SOCS2O14508 198 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 ACOX3O15254 700 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 DNAJB6O75190 326 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 ARAFP10398 606 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 GNSP15586 552 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 CSNK2A2P19784 350 aaPredicted RBP18.73■□□□□ 0.59
COPS7A-218ENST00000543939 CPN2P22792 545 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 BUD31P41223 144 aaPredicted RBP18.73■□□□□ 0.59
COPS7A-218ENST00000543939 HSPA13P48723 471 aa18.73■□□□□ 0.59
COPS7A-218ENST00000543939 CCT3P49368 545 aaKnown RBP18.73■□□□□ 0.59
COPS7A-218ENST00000543939 CRYBA2P53672 197 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms