RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 LDB3O75112 727 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 SNNO75324 88 aaPredicted RBP14.15□□□□□ -0.14
CD9-210ENST00000543916 SKAP2O75563 359 aaPredicted RBP14.15□□□□□ -0.14
CD9-210ENST00000543916 JUNP05412 331 aaKnown RBP14.15□□□□□ -0.14
CD9-210ENST00000543916 PRPH2P23942 346 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 PPP2R1BP30154 601 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 TIA1P31483 386 aaKnown RBP eCLIP14.15□□□□□ -0.14
CD9-210ENST00000543916 BUD31P41223 144 aaPredicted RBP14.15□□□□□ -0.14
CD9-210ENST00000543916 CCL11P51671 97 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 OR4D2P58180 307 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 XKR7Q5GH72 579 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 GALNT18Q6P9A2 607 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 RIPOR1Q6ZS17 1223 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 NDUFAF7Q7L592 441 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 MMP21Q8N119 569 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 EXD3Q8N9H8 876 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 CLEC1AQ8NC01 280 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 RAB3IL1Q8TBN0 382 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 ANKRD9Q96BM1 317 aaPredicted RBP14.15□□□□□ -0.14
CD9-210ENST00000543916 VPS50Q96JG6 964 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 IMMP1LQ96LU5 166 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 C3orf30Q96M34 536 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 ARHGAP9Q9BRR9 750 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 ILKAPQ9H0C8 392 aaPredicted RBP14.15□□□□□ -0.14
CD9-210ENST00000543916 RIC8BQ9NVN3 520 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 SIRT5Q9NXA8 310 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 GIMAP2Q9UG22 337 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.15□□□□□ -0.14
CD9-210ENST00000543916 IGSF10Q6WRI0 2623 aa14.15□□□□□ -0.14
CD9-210ENST00000543916 MED13Q9UHV7 2174 aa14.15□□□□□ -0.15
CD9-210ENST00000543916 BLACEA4D250 179 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 A6NL46 340 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 LSM1O15116 133 aaKnown RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 PGRMC2O15173 223 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 CEACAM4O75871 244 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 SNUPNO95149 360 aaKnown RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 CELA2AP08217 269 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 TLX1P31314 330 aaPredicted RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 RPL14P50914 215 aaKnown RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 ID2Q02363 134 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 AIMP2Q13155 320 aaKnown RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 KCNAB2Q13303 367 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 KIAA0040Q15053 153 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 NR6A1Q15406 480 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 NDUFAF5Q5TEU4 345 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 ATG16L1Q676U5 607 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 PAPD4Q6PIY7 484 aaKnown RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 TRIM42Q8IWZ5 723 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 OR4N5Q8IXE1 308 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 PARP9Q8IXQ6 854 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 ZNF75CPQ92670 426 aaPredicted RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 TM4SF18Q96CE8 201 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 UBL7Q96S82 380 aaPredicted RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 TUBB6Q9BUF5 446 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 MANSC1Q9H8J5 431 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 LRTM1Q9HBL6 345 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 ATP13A2Q9NQ11 1180 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 PNPOQ9NVS9 261 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 C1orf109Q9NX04 203 aa14.14□□□□□ -0.15
CD9-210ENST00000543916 POLR3HQ9Y535 204 aaPredicted RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 TNRC6AQ8NDV7 1962 aaKnown RBP14.14□□□□□ -0.15
CD9-210ENST00000543916 CACNA1BQ00975 2339 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 ATP6AP2A0A1C7CYW4 349 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 GNG14A0A1W2PPG7 69 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 A8MUA0 341 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 KLF11O14901 512 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 SEC22BO75396 215 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 ATP6AP2O75787 350 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 ANXA4P09525 319 aaPredicted RBP14.13□□□□□ -0.15
CD9-210ENST00000543916 NR1D1P20393 614 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 TAS2R50P59544 299 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 TRA2BP62995 288 aaKnown RBP14.13□□□□□ -0.15
CD9-210ENST00000543916 IGLV3-21P80748 117 aaPredicted RBP14.13□□□□□ -0.15
CD9-210ENST00000543916 OCRLQ01968 901 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 FOLH1Q04609 750 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 ACTN3Q08043 901 aaPredicted RBP14.13□□□□□ -0.15
CD9-210ENST00000543916 STX4Q12846 297 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 RAPSNQ13702 412 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 LY6DQ14210 128 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 PDCD2Q16342 344 aaPredicted RBP14.13□□□□□ -0.15
CD9-210ENST00000543916 GALNTL6Q49A17 601 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 OR52E8Q6IFG1 317 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 NOXRED1Q6NXP6 359 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 HOMEZQ8IX15 550 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 GALNT16Q8N428 558 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 FDCSPQ8NFU4 85 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 DNAJB14Q8TBM8 379 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 C16orf78Q8WTQ4 265 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 TANKQ92844 425 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 FCRL1Q96LA6 429 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 NUDT9Q9BW91 350 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 ALOXE3Q9BYJ1 711 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 WDR41Q9HAD4 459 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 PNO1Q9NRX1 252 aaKnown RBP14.13□□□□□ -0.15
CD9-210ENST00000543916 THAP1Q9NVV9 213 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 RALYQ9UKM9 306 aaKnown RBP14.13□□□□□ -0.15
CD9-210ENST00000543916 DLGAP4Q9Y2H0 992 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 PCDHA9Q9Y5H5 950 aa14.13□□□□□ -0.15
CD9-210ENST00000543916 A0A1W2PS29 197 aa14.12□□□□□ -0.15
CD9-210ENST00000543916 SAGE2PA6NJ88 616 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms