RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 SNX12Q9UMY4 172 aa20.91■□□□□ 0.94
CDKN3-207ENST00000543789 FAM221AA4D161 298 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 FAM47E-STBD1D6RA91 191 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 CTAG2O75638 210 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 ETHE1O95571 254 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 ADH7P40394 386 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 ARL4CP56559 192 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 MPEG1Q2M385 716 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 SLC25A35Q3KQZ1 300 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 PIGGQ5H8A4 983 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 C1orf185Q5T7R7 199 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 SLC35F6Q8N357 371 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 SNX31Q8N9S9 440 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 SRFBP1Q8NEF9 429 aaKnown RBP20.9■□□□□ 0.94
CDKN3-207ENST00000543789 C7orf57Q8NEG2 295 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 NINJ1Q92982 152 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 PTCD3Q96EY7 689 aaKnown RBP20.9■□□□□ 0.94
CDKN3-207ENST00000543789 CAPZA3Q96KX2 299 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 TMEM79Q9BSE2 394 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 CXXC4Q9H2H0 198 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 EXO5Q9H790 373 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 POPDC3Q9HBV1 291 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 SEMA4BQ9NPR2 832 aaPredicted RBP20.9■□□□□ 0.94
CDKN3-207ENST00000543789 COPS7AQ9UBW8 275 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 ATG4BQ9Y4P1 393 aa20.9■□□□□ 0.94
CDKN3-207ENST00000543789 TRGV5A0A0B4J1U4 118 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 HCN1O60741 890 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 ID2Q02363 134 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 DOC2AQ14183 400 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 HIST2H2ACQ16777 129 aaPredicted RBP20.89■□□□□ 0.93
CDKN3-207ENST00000543789 CDKL4Q5MAI5 379 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 SLC22A10Q63ZE4 541 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 HIST2H2AA3Q6FI13 130 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 SYDE1Q6ZW31 735 aaPredicted RBP20.89■□□□□ 0.93
CDKN3-207ENST00000543789 UBE3DQ7Z6J8 389 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 GPSM1Q86YR5 675 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 SPATA6LQ8N4H0 392 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 CHDHQ8NE62 594 aaPredicted RBP20.89■□□□□ 0.93
CDKN3-207ENST00000543789 ZNF721Q8TF20 911 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 ESAMQ96AP7 390 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 WDR34Q96EX3 536 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 RUNDC3BQ96NL0 473 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 MAPKAP1Q9BPZ7 522 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 TBCDQ9BTW9 1192 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 EFCAB11Q9BUY7 163 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 CNPPD1Q9BV87 410 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 RHOJQ9H4E5 214 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 CCM2LQ9NUG4 571 aaPredicted RBP20.89■□□□□ 0.93
CDKN3-207ENST00000543789 NSMCE4AQ9NXX6 385 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.89■□□□□ 0.93
CDKN3-207ENST00000543789 SPACA6W5XKT8 324 aa20.89■□□□□ 0.93
CDKN3-207ENST00000543789 STK16O75716 305 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 GABRA1P14867 456 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 ATP5A1P25705 553 aaKnown RBP20.88■□□□□ 0.93
CDKN3-207ENST00000543789 PIGAP37287 484 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 HSPA7P48741 367 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 SLC12A2P55011 1212 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 ASPHQ12797 758 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 LAPTM5Q13571 262 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 FBXO48Q5FWF7 155 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 PAGE2BQ5JRK9 111 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 SULT1C3Q6IMI6 304 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 ZNF793Q6ZN11 406 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 WDR53Q7Z5U6 358 aaPredicted RBP20.88■□□□□ 0.93
CDKN3-207ENST00000543789 ZZZ3Q8IYH5 903 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 ACOT4Q8N9L9 421 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 NUBPLQ8TB37 319 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 ANKRD9Q96BM1 317 aaPredicted RBP20.88■□□□□ 0.93
CDKN3-207ENST00000543789 SENP5Q96HI0 755 aaPredicted RBP20.88■□□□□ 0.93
CDKN3-207ENST00000543789 POLDIP3Q9BY77 421 aaKnown RBP20.88■□□□□ 0.93
CDKN3-207ENST00000543789 HCFC1P51610 2035 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 ZNF407Q9C0G0 2248 aa20.88■□□□□ 0.93
CDKN3-207ENST00000543789 COX7A2P14406 83 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 CD22P20273 847 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 KIR2DL3P43628 341 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 POU4F1Q01851 419 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 ILF2Q12905 390 aaKnown RBP20.87■□□□□ 0.93
CDKN3-207ENST00000543789 PDK4Q16654 411 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 ZNF791Q3KP31 576 aaPredicted RBP20.87■□□□□ 0.93
CDKN3-207ENST00000543789 RIPPLY2Q5TAB7 128 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 TGIF2LYQ8IUE0 185 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 FBXO36Q8NEA4 188 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 MCMBPQ9BTE3 642 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 PRM3Q9NNZ6 103 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 SH2D2AQ9NP31 389 aa20.87■□□□□ 0.93
CDKN3-207ENST00000543789 RTCAO00442 366 aaKnown RBP20.86■□□□□ 0.93
CDKN3-207ENST00000543789 WISP3O95389 354 aaPredicted RBP20.86■□□□□ 0.93
CDKN3-207ENST00000543789 MSH2P43246 934 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 IRF8Q02556 426 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 TBL3Q12788 808 aaKnown RBP20.86■□□□□ 0.93
CDKN3-207ENST00000543789 PDIA2Q13087 525 aaKnown RBP20.86■□□□□ 0.93
CDKN3-207ENST00000543789 AP5B1Q2VPB7 878 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 TMEM35AQ53FP2 167 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 SLC22A8Q8TCC7 542 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 DGAT2Q96PD7 388 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 MS4A8Q9BY19 250 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 CD274Q9NZQ7 290 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 SPRR3Q9UBC9 169 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 B4GALT7Q9UBV7 327 aa20.86■□□□□ 0.93
CDKN3-207ENST00000543789 ST6GALNAC2Q9UJ37 374 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms