RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 BMP4P12644 408 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF627Q7L945 461 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 PARP16Q8N5Y8 322 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 RPL3LQ92901 407 aaKnown RBP18.58■□□□□ 0.57
SUDS3-204ENST00000543473 MAL2Q969L2 176 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 CACNG6Q9BXT2 260 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 SLAMF8Q9P0V8 285 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 POU2F3Q9UKI9 436 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 MED31Q9Y3C7 131 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 ANKRD33BA6NCL7 494 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 UQCRC2P22695 453 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 TIA1P31483 386 aaKnown RBP eCLIP18.58■□□□□ 0.57
SUDS3-204ENST00000543473 RIPPLY1Q0D2K3 151 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 KCNC3Q14003 757 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 TSC22D1Q15714 1073 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 UPP1Q16831 310 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 TMED4Q7Z7H5 227 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 FAM124AQ86V42 546 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 OR6C4Q8NGE1 309 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 SLC5A11Q8WWX8 675 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 MCCC1Q96RQ3 725 aaPredicted RBP18.58■□□□□ 0.57
SUDS3-204ENST00000543473 EXO5Q9H790 373 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 TAC3Q9UHF0 121 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 STRCQ7RTU9 1775 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 LYRM1O43325 122 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 HOXD8P13378 290 aaPredicted RBP18.58■□□□□ 0.56
SUDS3-204ENST00000543473 ETFAP13804 333 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 UQCRC1P31930 480 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 BTN2A1Q7KYR7 527 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 ERI3O43414 337 aaKnown RBP18.58■□□□□ 0.56
SUDS3-204ENST00000543473 RPP14O95059 124 aaKnown RBP18.58■□□□□ 0.56
SUDS3-204ENST00000543473 APOC3P02656 99 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 EDN1P05305 212 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 PRKACBP22694 351 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 NRIP1P48552 1158 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 UAP1L1Q3KQV9 507 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 MORN1Q5T089 497 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 CPA6Q8N4T0 437 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 ZNF548Q8NEK5 533 aaPredicted RBP18.58■□□□□ 0.56
SUDS3-204ENST00000543473 TTLQ8NG68 377 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 SH3RF2Q8TEC5 729 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 SNAPC3Q92966 411 aa18.58■□□□□ 0.56
SUDS3-204ENST00000543473 WDR6Q9NNW5 1121 aaKnown RBP18.58■□□□□ 0.56
SUDS3-204ENST00000543473 ELOA3DA6NLF2 546 aaPredicted RBP18.57■□□□□ 0.56
SUDS3-204ENST00000543473 PRKYO43930 277 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 H2AFB2P0C5Z0 115 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 JUPP14923 745 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 EPCAMP16422 314 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 C21orf33P30042 268 aaPredicted RBP18.57■□□□□ 0.56
SUDS3-204ENST00000543473 ELOA3BQ3SY89 546 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 CNTN4Q8IWV2 1026 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 ELOA3Q8NG57 546 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 THAP6Q8TBB0 222 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 GNPDA2Q8TDQ7 276 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 LYARQ9NX58 379 aaKnown RBP18.57■□□□□ 0.56
SUDS3-204ENST00000543473 MTMR11A4FU01 709 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 ZNF623O75123 536 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 LDOC1O95751 146 aaPredicted RBP18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TNFRSF1BP20333 461 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 PREPP48147 710 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 CEBPGP53567 150 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 PON3Q15166 354 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 WDR45BQ5MNZ6 344 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 B3GNT8Q7Z7M8 397 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 METTL4Q8N3J2 472 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 RIPOR3Q96MK2 946 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 MGAT4AQ9UM21 535 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 HMX3A6NHT5 357 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 APODP05090 189 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 BMP8BP34820 402 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 RAB2AP61019 212 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 BCL7AQ4VC05 210 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 PLEKHS1Q5SXH7 462 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 BMP8AQ7Z5Y6 402 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 DCAF4L2Q8NA75 395 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 GRHL3Q8TE85 626 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 LCN9Q8WX39 176 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 PGAP3Q96FM1 320 aaPredicted RBP18.57■□□□□ 0.56
SUDS3-204ENST00000543473 RBM18Q96H35 190 aaKnown RBP18.57■□□□□ 0.56
SUDS3-204ENST00000543473 ACTR6Q9GZN1 396 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3DA0A087WVF3 549 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3IA0A087WXS9 549 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3EA0A087X179 549 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3KA0A087X1G2 549 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3FA6NER0 549 aaPredicted RBP18.57■□□□□ 0.56
SUDS3-204ENST00000543473 CD8B2A6NJW9 211 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3LB9A6J9 549 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 FCER2P06734 321 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3HP0C7X1 549 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 CD8BP10966 210 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 CYBAP13498 195 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 ARSAP15289 507 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3GQ6DHY5 549 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3CQ6IPX1 549 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TBC1D3Q8IZP1 549 aaPredicted RBP18.57■□□□□ 0.56
SUDS3-204ENST00000543473 ZNF461Q8TAF7 563 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 FATE1Q969F0 183 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 TREX1Q9NSU2 369 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 NLGN3Q9NZ94 848 aa18.57■□□□□ 0.56
SUDS3-204ENST00000543473 COLEC10Q9Y6Z7 277 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms