RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CLDN4O14493 209 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 UBDO15205 165 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 PROM1O43490 865 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 BMP10O95393 424 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 FHP07954 510 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 ZGLP1P0C6A0 271 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 SDC1P18827 310 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 SESN3P58005 492 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 NCF4Q15080 339 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 RPS6KA2Q15349 733 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 VWA2Q5GFL6 755 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 MFSD4BQ5TF39 518 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 MRPL14Q6P1L8 145 aaKnown RBP14.55□□□□□ -0.08
DDB1-216ENST00000539739 FAM47BQ8NA70 645 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 STT3BQ8TCJ2 826 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 KIAA1143Q96AT1 154 aaPredicted RBP14.55□□□□□ -0.08
DDB1-216ENST00000539739 TM4SF18Q96CE8 201 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 GPR87Q9BY21 358 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 WDR54Q9H977 334 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 WDR70Q9NW82 654 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 CTSFQ9UBX1 484 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 CROTQ9UKG9 612 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 TRIM33Q9UPN9 1127 aa14.55□□□□□ -0.08
DDB1-216ENST00000539739 CACNA1AO00555 2505 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 E9PBE3 544 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 TPD52L2O43399 206 aaKnown RBP14.54□□□□□ -0.08
DDB1-216ENST00000539739 KLHL41O60662 606 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 FAM107AO95990 144 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 IL3P08700 152 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 NR2F6P10588 404 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 IDO1P14902 403 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 TNFRSF17Q02223 184 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 C2orf80Q0P641 193 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 NKG7Q16617 165 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 NDUFAF5Q5TEU4 345 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 IKBIPQ70UQ0 350 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 MED25Q71SY5 747 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 ZNF595Q8IYB9 648 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 CT55Q8WUE5 264 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 TSSK3Q96PN8 268 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 EFHD1Q9BUP0 239 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 CCDC86Q9H6F5 360 aaKnown RBP14.54□□□□□ -0.08
DDB1-216ENST00000539739 RPF2Q9H7B2 306 aaKnown RBP14.54□□□□□ -0.08
DDB1-216ENST00000539739 MYNNQ9NPC7 610 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 BAIAP2L1Q9UHR4 511 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 KCND3Q9UK17 655 aa14.54□□□□□ -0.08
DDB1-216ENST00000539739 FARSAQ9Y285 508 aaKnown RBP14.54□□□□□ -0.08
DDB1-216ENST00000539739 A0A1W2PR48 441 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 C1orf226A1L170 272 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 VSTM2BA6NLU5 285 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 FAM227AF5H4B4 570 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 CYR61O00622 381 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 B4GALT2O60909 372 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 ATP6V1G2O95670 118 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 AIFM1O95831 613 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 G6PDP11413 515 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 DRD2P14416 443 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 ZNF24P17028 368 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 TACR1P25103 407 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 DLSTP36957 453 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 DIO3P55073 304 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 KLC1Q07866 573 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 DNASE1L3Q13609 305 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 ERV3-1Q14264 604 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 GSTA3Q16772 222 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 MINDY4Q4G0A6 757 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 METTL21CQ5VZV1 264 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 C18orf63Q68DL7 685 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 ZC3H7AQ8IWR0 971 aaKnown RBP14.53□□□□□ -0.08
DDB1-216ENST00000539739 PRSS58Q8IYP2 241 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 ENDOVQ8N8Q3 282 aaKnown RBP14.53□□□□□ -0.08
DDB1-216ENST00000539739 SMYD1Q8NB12 490 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 TANKQ92844 425 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 CSF3RQ99062 836 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 RBCK1Q9BYM8 510 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 YIPF3Q9GZM5 350 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 RABEP2Q9H5N1 569 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 TEX10Q9NXF1 929 aaPredicted RBP14.53□□□□□ -0.08
DDB1-216ENST00000539739 DKK4Q9UBT3 224 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 PSME2Q9UL46 239 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 G3BP2Q9UN86 482 aaKnown RBP14.53□□□□□ -0.08
DDB1-216ENST00000539739 MAPRE3Q9UPY8 281 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 PCDHA9Q9Y5H5 950 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 FER1L5A0AVI2 2057 aa14.53□□□□□ -0.08
DDB1-216ENST00000539739 LOC101059948A0A1B0GTJ6 334 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 MED19A0JLT2 244 aaPredicted RBP14.52□□□□□ -0.08
DDB1-216ENST00000539739 SNX3O60493 162 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 CDC123O75794 336 aaPredicted RBP14.52□□□□□ -0.08
DDB1-216ENST00000539739 HEXBP07686 556 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 ALDOCP09972 364 aaKnown RBP14.52□□□□□ -0.08
DDB1-216ENST00000539739 DDX5P17844 614 aaKnown RBP14.52□□□□□ -0.08
DDB1-216ENST00000539739 PPP2R1BP30154 601 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 RPL3P39023 403 aaKnown RBP14.52□□□□□ -0.08
DDB1-216ENST00000539739 ALDH9A1P49189 494 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 STX1BP61266 288 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 TMEM198Q66K66 360 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 FAM71E1Q6IPT2 247 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 ZNF248Q8NDW4 579 aa14.52□□□□□ -0.08
DDB1-216ENST00000539739 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.52□□□□□ -0.08
DDB1-216ENST00000539739 C10orf82Q8WW14 230 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms