RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 ABATP80404 500 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 ILF3Q12906 894 aaKnown RBP eCLIP19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 LSAMPQ13449 338 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 IL18R1Q13478 541 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 C1orf61Q13536 156 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 ZNF630Q2M218 657 aaPredicted RBP19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 ZBED5Q49AG3 693 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 C1orf216Q8TAB5 229 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 OR5P2Q8WZ92 322 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 PCED1AQ9H1Q7 454 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 LHX9Q9NQ69 397 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 PADI2Q9Y2J8 665 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 PCDHGA8Q9Y5G5 932 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 COLEC10Q9Y6Z7 277 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 PDPK1O15530 556 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 SERPIND1P05546 499 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 ITGAMP11215 1152 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 CD38P28907 300 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 TSSK4Q6SA08 328 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 CCDC80Q76M96 950 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 PLD3Q8IV08 490 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 PIK3C3Q8NEB9 887 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 NFKBIDQ8NI38 313 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 CREB3L4Q8TEY5 395 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 LZICQ8WZA0 190 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 HDAC2Q92769 488 aaKnown RBP19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 HSPA12BQ96MM6 686 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 NECAB3Q96P71 396 aaPredicted RBP19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 DDX31Q9H8H2 851 aaKnown RBP19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 SNX8Q9Y5X2 465 aa19.24■□□□□ 0.67
PACSIN3-211ENST00000539589 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 EEF1B2P24534 225 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 YAP1P46937 504 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 CDK9P50750 372 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 MANFP55145 182 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 CDK6Q00534 326 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 IQCCQ4KMZ1 466 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 TMEM35AQ53FP2 167 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 KDM4DQ6B0I6 523 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 OR4C11Q6IEV9 310 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 UBE3DQ7Z6J8 389 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 CYP4Z1Q86W10 505 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 PARGQ86W56 976 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 TMEFF1Q8IYR6 380 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 FAM174AQ8TBP5 190 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 BARD1Q99728 777 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 NPLQ9BXD5 320 aaPredicted RBP19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 ADNPQ9H2P0 1102 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 TMEM184CQ9NVA4 438 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 PDP1Q9P0J1 537 aaPredicted RBP19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 NCOR1O75376 2440 aa19.23■□□□□ 0.67
PACSIN3-211ENST00000539589 TMEM229AB2RXF0 380 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 UGT2B11O75310 529 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 IFNA14P01570 189 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 DAPP51397 102 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 TRA2BP62995 288 aaKnown RBP19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 EEF1A2Q05639 463 aaKnown RBP19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 LAPTM4AQ15012 233 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 ZC3H7AQ8IWR0 971 aaKnown RBP19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 SLC30A8Q8IWU4 369 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 TBC1D19Q8N5T2 526 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 OR4E2Q8NGC2 313 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 SPPL2AQ8TCT8 520 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 ZNF764Q96H86 408 aaPredicted RBP19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 GSDMCQ9BYG8 508 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 EPS8L2Q9H6S3 715 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 RUBCNLQ9H714 662 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 CXorf36Q9H7Y0 433 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 NEUROD4Q9HD90 331 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 LRIT2A6NDA9 550 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 BCKDKO14874 412 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 TMPRSS11DO60235 418 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 C9P02748 559 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 GSTM2P28161 218 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 TTKP33981 857 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 RPS6KA3P51812 740 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 RACK1P63244 317 aaKnown RBP19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 C6orf141Q5SZD1 244 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 ZNF691Q5VV52 312 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 ZNF773Q6PK81 442 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 EPYCQ99645 322 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 LRRC61Q9BV99 259 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 MIR1-1HGQ9H1L0 117 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 THUMPD1Q9NXG2 353 aaKnown RBP19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 BLOC1S6Q9UL45 172 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 ANGPT4Q9Y264 503 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 PCDHGB3Q9Y5G1 929 aa19.22■□□□□ 0.67
PACSIN3-211ENST00000539589 BTN3A3O00478 584 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 MITFO75030 526 aaPredicted RBP19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 ARAFP10398 606 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 JUNDP17535 347 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 CRHBPP24387 322 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 NDUFS1P28331 727 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 RYKP34925 604 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 PLA2G16P53816 162 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 TOP3AQ13472 1001 aaPredicted RBP19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 IFI44LQ53G44 452 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 CRB2Q5IJ48 1285 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 FAM180BQ6P0A1 224 aa19.21■□□□□ 0.67
PACSIN3-211ENST00000539589 KCTD8Q6ZWB6 473 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms