RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 K7ENP7 123 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 SLC28A1O00337 649 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 FCHO1O14526 889 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 PGRMC2O15173 223 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 B4GALT2O60909 372 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 AIFM1O95831 613 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 PIM1P11309 404 aaPredicted RBP12.21□□□□□ -0.45
CCDC42-202ENST00000539522 RNH1P13489 461 aaKnown RBP12.21□□□□□ -0.45
CCDC42-202ENST00000539522 MAOAP21397 527 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 EPHA3P29320 983 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 PPP2R1BP30154 601 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 TIA1P31483 386 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC42-202ENST00000539522 RPS15P62841 145 aaKnown RBP12.21□□□□□ -0.45
CCDC42-202ENST00000539522 MC1RQ01726 317 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 TNFRSF17Q02223 184 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 DUSP2Q05923 314 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 UGT8Q16880 541 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 LSM12Q3MHD2 195 aaKnown RBP12.21□□□□□ -0.45
CCDC42-202ENST00000539522 C6orf136Q5SQH8 315 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 NXNQ6DKJ4 435 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 INO80CQ6PI98 192 aaPredicted RBP12.21□□□□□ -0.45
CCDC42-202ENST00000539522 TMEM205Q6UW68 189 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 KIRREL2Q6UWL6 708 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 DGAT2L6Q6ZPD8 337 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 LARP4Q71RC2 724 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC42-202ENST00000539522 GPR180Q86V85 440 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 DDIASQ8IXT1 998 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 SRFBP1Q8NEF9 429 aaKnown RBP12.21□□□□□ -0.45
CCDC42-202ENST00000539522 SNRNP27Q8WVK2 155 aaKnown RBP12.21□□□□□ -0.45
CCDC42-202ENST00000539522 C8orf44Q96CB5 159 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 OR1F2PQ96R84 312 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 OR52B2Q96RD2 323 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 YIPF2Q9BWQ6 316 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 AKTIPQ9H8T0 292 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 SAR1AQ9NR31 198 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 RIC8BQ9NVN3 520 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 MCM8Q9UJA3 840 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 C3orf18Q9UK00 162 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 KCND3Q9UK17 655 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 MKL2Q9ULH7 1088 aa12.21□□□□□ -0.45
CCDC42-202ENST00000539522 TPRP12270 2363 aaKnown RBP12.21□□□□□ -0.46
CCDC42-202ENST00000539522 MED13Q9UHV7 2174 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 LOC102723996A0A087X1L8 192 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 GOLGA8QA0A0J9YX86 632 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 A0A1W2PQ72 361 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 GOLGA8OA6NCC3 632 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 GLOD5A6NK44 160 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 GOLGA8NF8WBI6 632 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 PCDH7O60245 1069 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 FGF17O60258 216 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 PEX11AO75192 247 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 ALOX12BO75342 701 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 ATP5HO75947 161 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 SDC1P18827 310 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 NCF2P19878 526 aaPredicted RBP12.2□□□□□ -0.46
CCDC42-202ENST00000539522 ADSLP30566 484 aaPredicted RBP12.2□□□□□ -0.46
CCDC42-202ENST00000539522 FOLR3P41439 243 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 IRX1P78414 480 aaPredicted RBP12.2□□□□□ -0.46
CCDC42-202ENST00000539522 TGM3Q08188 693 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 GALNTL6Q49A17 601 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 CRTC2Q53ET0 693 aaPredicted RBP12.2□□□□□ -0.46
CCDC42-202ENST00000539522 SPIN4Q56A73 249 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 CCNYL2Q5T2Q4 361 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 FAM91A1Q658Y4 838 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 FAAH2Q6GMR7 532 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 NIPAL1Q6NVV3 410 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 NOXRED1Q6NXP6 359 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 PLPP5Q8NEB5 264 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 DNAJB14Q8TBM8 379 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 C16orf78Q8WTQ4 265 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 CRB3Q9BUF7 120 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 FAM117AQ9C073 453 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 ROGDIQ9GZN7 287 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 COPS7BQ9H9Q2 264 aaPredicted RBP12.2□□□□□ -0.46
CCDC42-202ENST00000539522 LRTM1Q9HBL6 345 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 PRM3Q9NNZ6 103 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 C14orf105Q9NVL8 296 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 C1orf109Q9NX04 203 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 C5AR2Q9P296 337 aa12.2□□□□□ -0.46
CCDC42-202ENST00000539522 GPN3Q9UHW5 284 aaPredicted RBP12.2□□□□□ -0.46
CCDC42-202ENST00000539522 IGHV3-20A0A0C4DH32 117 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 TCRBV16S1A1N1A0A5B0 115 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 RRP8O43159 456 aaKnown RBP12.19□□□□□ -0.46
CCDC42-202ENST00000539522 RGS14O43566 566 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 LDB3O75112 727 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 IL3P08700 152 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 ALDOCP09972 364 aaKnown RBP12.19□□□□□ -0.46
CCDC42-202ENST00000539522 PRKAR1AP10644 381 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 COX6A1P12074 109 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 LBPP18428 481 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 MMP11P24347 488 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 EMP2P54851 167 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 RPL38P63173 70 aaKnown RBP12.19□□□□□ -0.46
CCDC42-202ENST00000539522 IGLV3-21P80748 117 aaPredicted RBP12.19□□□□□ -0.46
CCDC42-202ENST00000539522 ID2Q02363 134 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 OCA2Q04671 838 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 ACSM2AQ08AH3 577 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 Q0VFX4 171 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 CDC20Q12834 499 aa12.19□□□□□ -0.46
CCDC42-202ENST00000539522 ATP1A4Q13733 1029 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms