RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 A8MUA0 341 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 HRKO00198 91 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 ZNF195O14628 629 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 PCDH7O60245 1069 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 CEACAM4O75871 244 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 RSL1D1O76021 490 aaKnown RBP12.26□□□□□ -0.45
CHFR-216ENST00000538235 ACPPP15309 386 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 CPN2P22792 545 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 TSFMP43897 325 aaKnown RBP12.26□□□□□ -0.45
CHFR-216ENST00000538235 ASPHQ12797 758 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 STX3Q13277 289 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 RFTN2Q52LD8 501 aaPredicted RBP12.26□□□□□ -0.45
CHFR-216ENST00000538235 COLEC12Q5KU26 742 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 C10orf62Q5T681 223 aaPredicted RBP12.26□□□□□ -0.45
CHFR-216ENST00000538235 GALNT18Q6P9A2 607 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 GPR180Q86V85 440 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 APLFQ8IW19 511 aaPredicted RBP12.26□□□□□ -0.45
CHFR-216ENST00000538235 KIF2BQ8N4N8 673 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 GBP7Q8N8V2 638 aaPredicted RBP12.26□□□□□ -0.45
CHFR-216ENST00000538235 SRFBP1Q8NEF9 429 aaKnown RBP12.26□□□□□ -0.45
CHFR-216ENST00000538235 DNAJB14Q8TBM8 379 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 EGLN2Q96KS0 407 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 PTCHD1Q96NR3 888 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 ING2Q9H160 280 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 CLK4Q9HAZ1 481 aaKnown RBP12.26□□□□□ -0.45
CHFR-216ENST00000538235 PRDM9Q9NQV7 894 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 SIRT5Q9NXA8 310 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 MARCOQ9UEW3 520 aaPredicted RBP12.26□□□□□ -0.45
CHFR-216ENST00000538235 ADAM29Q9UKF5 820 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 RAP2CQ9Y3L5 183 aa12.26□□□□□ -0.45
CHFR-216ENST00000538235 PRKNO60260 465 aaPredicted RBP12.25□□□□□ -0.45
CHFR-216ENST00000538235 PRMT3O60678 531 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 CLPSP04118 112 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 IL3P08700 152 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 PRR35P0CG20 571 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 NR2F6P10588 404 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 ITGAMP11215 1152 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 SDC1P18827 310 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 CD97P48960 835 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 RPL38P63173 70 aaKnown RBP12.25□□□□□ -0.45
CHFR-216ENST00000538235 FOLH1Q04609 750 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 GABPB1Q06547 395 aaPredicted RBP12.25□□□□□ -0.45
CHFR-216ENST00000538235 ZNF33BQ06732 778 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 TGM3Q08188 693 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 NSDHLQ15738 373 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 CCNYL2Q5T2Q4 361 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 NDUFAF5Q5TEU4 345 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 VWA5B1Q5TIE3 1220 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 NIPAL1Q6NVV3 410 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 BORAQ6PGQ7 559 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 PAPD4Q6PIY7 484 aaKnown RBP12.25□□□□□ -0.45
CHFR-216ENST00000538235 CPEB2Q7Z5Q1 589 aaKnown RBP12.25□□□□□ -0.45
CHFR-216ENST00000538235 PARP9Q8IXQ6 854 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 CLYBLQ8N0X4 340 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 ZSCAN1Q8NBB4 408 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 SIMC1Q8NDZ2 872 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 FDCSPQ8NFU4 85 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 CLHC1Q8NHS4 586 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 C16orf78Q8WTQ4 265 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 SREK1Q8WXA9 508 aaKnown RBP12.25□□□□□ -0.45
CHFR-216ENST00000538235 THAP4Q8WY91 577 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 ZNF75CPQ92670 426 aaPredicted RBP12.25□□□□□ -0.45
CHFR-216ENST00000538235 ROGDIQ9GZN7 287 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 PRM3Q9NNZ6 103 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 LYARQ9NX58 379 aaKnown RBP12.25□□□□□ -0.45
CHFR-216ENST00000538235 NKIRAS1Q9NYS0 192 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 MCM8Q9UJA3 840 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 PRDM4Q9UKN5 801 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 MMACHCQ9Y4U1 282 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 CSAG2Q9Y5P2 127 aa12.25□□□□□ -0.45
CHFR-216ENST00000538235 A6NL46 340 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 PSMD12O00232 456 aaPredicted RBP12.24□□□□□ -0.45
CHFR-216ENST00000538235 SDHDO14521 159 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 CRCPO75575 148 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 HPP00738 406 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 PRB1P04280 392 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 ITGB2P05107 769 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 CT62P0C5K7 136 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 IL10P22301 178 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 JAK1P23458 1154 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 GRK2P25098 689 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 NUP214P35658 2090 aaPredicted RBP12.24□□□□□ -0.45
CHFR-216ENST00000538235 GPR143P51810 404 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 MAPK12P53778 367 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 HSD17B7P56937 341 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 SLC26A5P58743 744 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 SKP1P63208 163 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 DUSP8Q13202 625 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 NR6A1Q15406 480 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 MPEG1Q2M385 716 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 ZNF385BQ569K4 471 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 B3GNTL1Q67FW5 361 aaPredicted RBP12.24□□□□□ -0.45
CHFR-216ENST00000538235 DDIASQ8IXT1 998 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 ZNF595Q8IYB9 648 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 PPP1R14CQ8TAE6 165 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 PTPMT1Q8WUK0 201 aaPredicted RBP12.24□□□□□ -0.45
CHFR-216ENST00000538235 C1orf50Q9BV19 199 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 RPF2Q9H7B2 306 aaKnown RBP12.24□□□□□ -0.45
CHFR-216ENST00000538235 MANSC1Q9H8J5 431 aa12.24□□□□□ -0.45
CHFR-216ENST00000538235 LRTM1Q9HBL6 345 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms