RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CHIT1Q13231 466 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 DUOXA1Q1HG43 343 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 C9orf57Q5W0N0 161 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TNFAIP8L2Q6P589 184 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CORO6Q6QEF8 472 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 GLB1LQ6UWU2 654 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 RFKQ969G6 155 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CPNE2Q96FN4 548 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF382Q96SR6 550 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 GDF15Q99988 308 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 MGME1Q9BQP7 344 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 AMBRA1Q9C0C7 1298 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SLAMF7Q9NQ25 335 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 EQTNQ9NQ60 294 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 MGAT4CQ9UBM8 478 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CDK5RAP2Q96SN8 1893 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PQLC2LA1A4F0 135 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 C5orf51A6NDU8 294 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF98A6NK75 572 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 LGALS2P05162 132 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RAB3BP20337 219 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 DDCP20711 480 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 LMO2P25791 158 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RPL3P39023 403 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 HSPB3Q12988 150 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF169Q14929 603 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 GRIN2CQ14957 1233 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 SMN1Q16637 294 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 LRRC37A5PQ49AS3 106 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PAGE3Q5JUK9 113 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 TREML2Q5T2D2 321 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CPZQ66K79 652 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 KLHL24Q6TFL4 600 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 STPG2Q8N412 459 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 LINC00471Q8N535 108 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 BOLLQ8N9W6 283 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PCSK9Q8NBP7 692 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 OR2T11Q8NH01 316 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PIGXQ8TBF5 258 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 GPR152Q8TDT2 470 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 GPR137Q96N19 417 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 NECTIN4Q96NY8 510 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 MBOAT4Q96T53 435 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 TMEM185BQ9H7F4 350 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 MARCH2Q9P0N8 246 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RIPK3Q9Y572 518 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF705EA8MWA4 302 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 LRRN3E7EW58 273 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 J3KR12 359 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ACSL4O60488 711 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 NIPSNAP2O75323 286 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 SMIM6P0DI80 62 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 HK1P19367 917 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PSMA3P25788 255 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 GRM5P41594 1212 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 AFF1P51825 1210 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 POU6F2P78424 691 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CACNG1Q06432 222 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 TMEM192Q8IY95 271 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 TCEANCQ8N8B7 351 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PLA2G15Q8NCC3 412 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CD300LFQ8TDQ1 290 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 EXOSC8Q96B26 276 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 QRFPRQ96P65 431 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 NIFKQ9BYG3 293 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 OR10A4Q9H209 315 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RHBGQ9H310 441 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 LRRN3Q9H3W5 708 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 HMX1Q9NP08 348 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 UPB1Q9UBR1 384 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PADI2Q9Y2J8 665 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 KCNK7Q9Y2U2 307 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 TAF1LQ8IZX4 1826 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 A0A1W2PQL4 384 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 hCG_1807616A0A1W2PRN6 198 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 FAM86C2PA6NEL3 165 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 STMND1H3BQB6 276 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PRRG1O14668 218 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 IGSF6O95976 241 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CH25HO95992 272 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PRR35P0CG20 571 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CD1DP15813 335 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 GDF5P43026 501 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CCR4P51679 360 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF280AP59817 542 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CREMQ03060 361 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 SRSF11Q05519 484 aaKnown RBP5.18□□□□□ -1.58
PTPRD-213ENST00000537002 SLC3A1Q07837 685 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 VEZF1Q14119 521 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 PTGR1Q14914 329 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 GTDC1Q4AE62 458 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 C6orf136Q5SQH8 315 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 DNAJC22Q8N4W6 341 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 FAM110BQ8TC76 370 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 CIPCQ9C0C6 399 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 B3GNT4Q9C0J1 378 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 RNF208Q9H0X6 261 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 OR51V1Q9H2C8 321 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 COL1A2P08123 1366 aa5.18□□□□□ -1.58
PTPRD-213ENST00000537002 KLRG2A4D1S0 409 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms