RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 EPYCQ99645 322 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 SLX1AQ9BQ83 275 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 FAM120CQ9NX05 1096 aaKnown RBP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 TMED5Q9Y3A6 229 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 WNT6Q9Y6F9 365 aa13.25□□□□□ -0.29
LPCAT3-203ENST00000535479 A0A0B4J293 547 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 C2orf92A0A1B0GVN3 265 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 A0A1W2PRB8 838 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 PRR23AA6NEV1 266 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 TLR4O00206 839 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 CTSLP07711 333 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 HOXB3P14651 431 aaPredicted RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 SELPP16109 830 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 XPAP23025 273 aaPredicted RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 TIA1P31483 386 aaKnown RBP eCLIP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 SDC2P34741 201 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 CDC42P60953 191 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 GPR33Q49SQ1 333 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 THOC7Q6I9Y2 204 aaKnown RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 FRMPD2BQ6IN97 320 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 ADCK2Q7Z695 626 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 CLP1Q92989 425 aaKnown RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 RNF31Q96EP0 1072 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 IGSF21Q96ID5 467 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 GABARAPL3Q9BY60 117 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 C11orf54Q9H0W9 315 aaPredicted RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 TBC1D17Q9HA65 648 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 CPNE5Q9HCH3 593 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 SPATA6Q9NWH7 488 aaPredicted RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 GULP1Q9UBP9 304 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 INSL5Q9Y5Q6 135 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 A0A1W2PQL4 384 aaPredicted RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 ZC3H12DA2A288 527 aaKnown RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 GFYI3L273 518 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 B4GALT2O60909 372 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 KLHL18O94889 574 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 IGHA2P01877 340 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 IL7P13232 177 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 ETV5P41161 510 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 MAN2A2P49641 1150 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 ETV1P50549 477 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 CRISP1P54107 249 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 RPS25P62851 125 aaKnown RBP13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 P2RY14Q15391 338 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 TMPRSS11AQ6ZMR5 421 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 USP30Q70CQ3 517 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 C16orf78Q8WTQ4 265 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 ASZ1Q8WWH4 475 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 KAT2AQ92830 837 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 TSSK6Q9BXA6 273 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 HDHD5Q9BXW7 423 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 CACNA1CQ13936 2221 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 CACNA1IQ9P0X4 2223 aa13.24□□□□□ -0.29
LPCAT3-203ENST00000535479 TEX28O15482 410 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 TNFRSF21O75509 655 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 C8GP07360 202 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 PSMA3P25788 255 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 SYCE2Q6PIF2 218 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 DDX53Q86TM3 631 aaKnown RBP13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 KIAA1958Q8N8K9 716 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 GPR32P1Q8NGA4 272 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 TMEM19Q96HH6 336 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 TMED9Q9BVK6 235 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 SLC46A2Q9BY10 475 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 CDCP1Q9H5V8 836 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 SP140LQ9H930 580 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 IL21Q9HBE4 155 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 MRPL17Q9NRX2 175 aaKnown RBP13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 C1GALT1Q9NS00 363 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 CUEDC1Q9NWM3 386 aaPredicted RBP13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 ASIC5Q9NY37 505 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 CNIH4Q9P003 139 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 MEIOCA2RUB1 952 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 LEFTY2O00292 366 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 TMEM115Q12893 351 aaPredicted RBP13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 MMAAQ8IVH4 418 aaKnown RBP13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 SLC30A8Q8IWU4 369 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 ATP6V1C2Q8NEY4 427 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 OR52E4Q8NGH9 312 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 OR2A12Q8NGT7 310 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 SLC38A5Q8WUX1 472 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 NACC2Q96BF6 587 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 TMEM169Q96HH4 297 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 ST6GAL2Q96JF0 529 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 PIP5K1AQ99755 562 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 PLA2G12AQ9BZM1 189 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 CLN6Q9NWW5 311 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 POFUT2Q9Y2G5 429 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 CNTRLQ7Z7A1 2325 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 C5orf58C9J3I9 102 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 ANHXE9PGG2 379 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 PCGF2P35227 344 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 CLDN2P57739 230 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 LRRC32Q14392 662 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 MFSD4BQ5TF39 518 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 PLAG1Q6DJT9 500 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 ACSM5Q6NUN0 579 aa13.23□□□□□ -0.29
LPCAT3-203ENST00000535479 ERAP2Q6P179 960 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms