RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 CATSPEREQ5SY80 951 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 ERI1Q8IV48 349 aaKnown RBP17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 OR5L2Q8NGL0 311 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 OR8S1Q8NH09 359 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 THAP4Q8WY91 577 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 TMEM184CQ9NVA4 438 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 RARRES3Q9UL19 164 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 MYOCOSA0A1B0GUC4 107 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 PCP4L1A6NKN8 68 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 CDH15P55291 814 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 LRRC25Q8N386 305 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 PSD4Q8NDX1 1056 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 RNF6Q9Y252 685 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 PPM1BO75688 479 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 AOC1P19801 751 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 PGCP20142 388 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 STOMP27105 288 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 RBMXP38159 391 aaKnown RBP17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 RNF144AP50876 292 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 RHDQ02161 417 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 LAPTM4AQ15012 233 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 MLC1Q15049 377 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 NNATQ16517 81 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 GPR62Q9BZJ7 368 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 C8orf33Q9H7E9 229 aaPredicted RBP17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 ENAMQ9NRM1 1142 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 IGLON5A6NGN9 336 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 A6NLC8 198 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 GPR143P51810 404 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 KIAA0319Q5VV43 1072 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 GLIS1Q8NBF1 620 aa17.45■□□□□ 0.38
SFSWAP-203ENST00000535236 GSTT2P0CG29 244 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 TIA1P31483 386 aaKnown RBP eCLIP17.44■□□□□ 0.381e-7■□□□□ 8.4
SFSWAP-203ENST00000535236 GBX1Q14549 363 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 GRHL2Q6ISB3 625 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 ZC3H14Q6PJT7 736 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 UNQ6126/PRO20091Q6UXV3 157 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 SLC37A3Q8NCC5 494 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 NECTIN4Q96NY8 510 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 MROQ9BYG7 248 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 HSD11B2P80365 405 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 SHQ1Q6PI26 577 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 GALNT12Q8IXK2 581 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 UBQLNLQ8IYU4 475 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 POGLUT1Q8NBL1 392 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 GALNT11Q8NCW6 608 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 NECAB3Q96P71 396 aaPredicted RBP17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 SEC14L4Q9UDX3 406 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 EPHA6Q9UF33 1036 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 NUP50Q9UKX7 468 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 ZNF487B1APH4 448 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 XPNPEP2O43895 674 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 SYPP08247 313 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 CD83Q01151 205 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 EIF4HQ15056 248 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 SLC36A3Q495N2 470 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 RPL13AP3Q6NVV1 102 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 PGAM5Q96HS1 289 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 DPH7Q9BTV6 452 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 PCDHGA6Q9Y5G7 932 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 DHCR24Q15392 516 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 SMYD5Q6GMV2 418 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 SNIP1Q8TAD8 396 aaKnown RBP17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 ZNF384Q8TF68 577 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 TSACCQ96A04 125 aaPredicted RBP17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 ZNF285Q96NJ3 590 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 NEDD4LQ96PU5 975 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 C1orf21Q9H246 121 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 LIPT1Q9Y234 373 aa17.44■□□□□ 0.38
SFSWAP-203ENST00000535236 ADORA3P0DMS8 318 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 FOSL2P15408 326 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 DPP6P42658 865 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 TBPL1P62380 186 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 MALLQ13021 153 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 SERINC5Q86VE9 423 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 TIGD4Q8IY51 512 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 OR2T33Q8NG76 320 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 IMP4Q96G21 291 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 SIGLEC10Q96LC7 697 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 ZNF701Q9NV72 531 aaPredicted RBP17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 MKLN1Q9UL63 735 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 DHDHQ9UQ10 334 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 KLHL33A6NCF5 533 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 C2orf78A6NCI8 922 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 LRRN3E7EW58 273 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 FAAHO00519 579 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 IRF2P14316 349 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 PSMA6P60900 246 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 ZNF542PQ5EBM4 170 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 FAM69BQ5VUD6 431 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 TXNDC5Q8NBS9 432 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 IGSF8Q969P0 613 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 LRRN3Q9H3W5 708 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 NUFIP1Q9UHK0 495 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 A0A096LPI6 279 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 SMCO3A2RU48 225 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 TBX10O75333 385 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 BNIP3Q12983 259 aa17.43■□□□□ 0.38
SFSWAP-203ENST00000535236 C6orf136Q5SQH8 315 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms