RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 PNRC1Q12796 327 aaPredicted RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 CBX3Q13185 183 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 DYNC1I2Q13409 638 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 CUL3Q13618 768 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 ITGA9Q13797 1035 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 PTK6Q13882 451 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 SNTB1Q13884 538 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 PCLAFQ15004 111 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 STX1AQ16623 288 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 PTGISQ16647 500 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 UGCGQ16739 394 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 WHAMMP3Q1A5X7 153 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 TYSND1Q2T9J0 566 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 CEP55Q53EZ4 464 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 TOR1AIP1Q5JTV8 583 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 GLRA4Q5JXX5 417 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 ALS2CLQ60I27 953 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 DHRS7BQ6IAN0 325 aaPredicted RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 GALNT17Q6IS24 598 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 KDM7AQ6ZMT4 941 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 CCDC73Q6ZRK6 1079 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 C3orf62Q6ZUJ4 267 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 CCDC80Q76M96 950 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 ERN2Q76MJ5 926 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 Q7L0L9 218 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 HAUS6Q7Z4H7 955 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 GLRX5Q86SX6 157 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 CCDC60Q8IWA6 550 aaPredicted RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 CD302Q8IX05 232 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 IQCF2Q8IXL9 164 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 BLIDQ8IZY5 108 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 GBP7Q8N8V2 638 aaPredicted RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 NECAB1Q8N987 351 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 MCUQ8NE86 351 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 FBXO30Q8TB52 745 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 AENQ8WTP8 325 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 SEPT1Q8WYJ6 367 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 MRPS27Q92552 414 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 DAZLQ92904 295 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 DHX58Q96C10 678 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 AK8Q96MA6 479 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 SPATA33Q96N06 139 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 GUCD1Q96NT3 240 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 ABHD1Q96SE0 405 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 FERMT1Q9BQL6 677 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 RHNO1Q9BSD3 238 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 GLT8D2Q9H1C3 349 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 PPIL3Q9H2H8 161 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 OSGEPL1Q9H4B0 414 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 CHMP1AQ9HD42 196 aaPredicted RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 C6orf50Q9HD87 102 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 SIX2Q9NPC8 291 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 ATXN10Q9UBB4 475 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 TUBGCP4Q9UGJ1 667 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 TUBE1Q9UJT0 475 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 KCNJ14Q9UNX9 436 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 ZNF148Q9UQR1 794 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 LIPT1Q9Y234 373 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 PPP2R2CQ9Y2T4 447 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 WBP11Q9Y2W2 641 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 GRIP1Q9Y3R0 1128 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 SPIN1Q9Y657 262 aaPredicted RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 IGSF9BQ9UPX0 1349 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 KMT2EQ8IZD2 1858 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 CUL9Q8IWT3 2517 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 KIAA1549LQ6ZVL6 1849 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 IGHV4-61A0A0C4DH41 118 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 RNF103-CHMP3A0A140T963 221 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 PRSS51A0A1B0GVH4 220 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 A0A1W2PN81 502 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 A0A1W2PRB8 838 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 OR2A25A4D2G3 310 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 A6NL46 340 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 OR6C76A6NM76 312 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 HHLA1C9JL84 531 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 GOLGA8KD6RF30 607 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 RNF103O00237 685 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 BIRC5O15392 142 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 SSX4O60224 188 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 PRPSAP2O60256 369 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CREG1O75629 220 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 PSMD10O75832 226 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 RECQL5O94762 991 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 LUC7L3O95232 432 aaKnown RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 NADKO95544 446 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 ATP6V1G2O95670 118 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 FAM107AO95990 144 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 IGHV4-59P01825 116 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CHRNA1P02708 482 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 SUPT20HL2P0C7V6 817 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 KRT13P13646 458 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 GNA11P29992 359 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 SLC6A6P31641 620 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CHRNA7P36544 502 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 CSE1LP55060 971 aaKnown RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 ELF3P78545 371 aaPredicted RBP3.1□□□□□ -1.91
USP48-215ENST00000534705 SP4Q02446 784 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 LRRC74AQ0VAA2 488 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 RPA4Q13156 261 aa3.1□□□□□ -1.91
USP48-215ENST00000534705 ALCAMQ13740 583 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms