RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 PRAMEF9Q5VWM5 478 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 ARSKQ6UWY0 536 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 TGIF2LYQ8IUE0 185 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 SLC35F6Q8N357 371 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 TCAIMQ8N3R3 496 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 CHDHQ8NE62 594 aaPredicted RBP12.83□□□□□ -0.36
CCDC84-208ENST00000534656 ZNF721Q8TF20 911 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 WDR34Q96EX3 536 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 PTCD3Q96EY7 689 aaKnown RBP12.83□□□□□ -0.36
CCDC84-208ENST00000534656 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 KCNC2Q96PR1 638 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 MAPKAP1Q9BPZ7 522 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 TMEM79Q9BSE2 394 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 POLDIP3Q9BY77 421 aaKnown RBP12.83□□□□□ -0.36
CCDC84-208ENST00000534656 ROGDIQ9GZN7 287 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 DERL2Q9GZP9 239 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 POPDC3Q9HBV1 291 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 SEMA4BQ9NPR2 832 aaPredicted RBP12.83□□□□□ -0.36
CCDC84-208ENST00000534656 CCM2LQ9NUG4 571 aaPredicted RBP12.83□□□□□ -0.36
CCDC84-208ENST00000534656 DNAJC11Q9NVH1 559 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 COPS7AQ9UBW8 275 aa12.83□□□□□ -0.36
CCDC84-208ENST00000534656 TRGV5A0A0B4J1U4 118 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 FAM47E-STBD1D6RA91 191 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ETHE1O95571 254 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 GABRA1P14867 456 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 CD22P20273 847 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 PIGAP37287 484 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ARL4CP56559 192 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ASPHQ12797 758 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ZNF791Q3KP31 576 aaPredicted RBP12.82□□□□□ -0.36
CCDC84-208ENST00000534656 CDKL4Q5MAI5 379 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 RIPPLY2Q5TAB7 128 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ZNF793Q6ZN11 406 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 UBE3DQ7Z6J8 389 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ANKMY2Q8IV38 441 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 SRFBP1Q8NEF9 429 aaKnown RBP12.82□□□□□ -0.36
CCDC84-208ENST00000534656 C7orf57Q8NEG2 295 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ANKRD9Q96BM1 317 aaPredicted RBP12.82□□□□□ -0.36
CCDC84-208ENST00000534656 RUNDC3BQ96NL0 473 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 MCMBPQ9BTE3 642 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 TBCDQ9BTW9 1192 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 EFCAB11Q9BUY7 163 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 CNPPD1Q9BV87 410 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 RHOJQ9H4E5 214 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 EXO5Q9H790 373 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 CNOT10Q9H9A5 744 aaKnown RBP12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ZNF358Q9NW07 568 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 MOCS1Q9NZB8 636 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 WWOXQ9NZC7 414 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 ST6GALNAC2Q9UJ37 374 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 SNX12Q9UMY4 172 aa12.82□□□□□ -0.36
CCDC84-208ENST00000534656 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.82□□□□□ -0.36
CCDC84-208ENST00000534656 STK16O75716 305 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 WISP3O95389 354 aaPredicted RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 ENDOUP21128 410 aaKnown RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 ATP5A1P25705 553 aaKnown RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 HSPA7P48741 367 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 SLC12A2P55011 1212 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 ID2Q02363 134 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 ILF2Q12905 390 aaKnown RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 LAPTM5Q13571 262 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 HIST2H2ACQ16777 129 aaPredicted RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 FBXO48Q5FWF7 155 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 SLC22A10Q63ZE4 541 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 HIST2H2AA3Q6FI13 130 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 SULT1C3Q6IMI6 304 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 ADGRD1Q6QNK2 874 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 SYDE1Q6ZW31 735 aaPredicted RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 WDR53Q7Z5U6 358 aaPredicted RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 GPSM1Q86YR5 675 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 ZZZ3Q8IYH5 903 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 ACOT4Q8N9L9 421 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 SNX31Q8N9S9 440 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 NUBPLQ8TB37 319 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 PAQR8Q8TEZ7 354 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 ESAMQ96AP7 390 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 SENP5Q96HI0 755 aaPredicted RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 GPATCH1Q9BRR8 931 aaKnown RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 MS4A8Q9BY19 250 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 LIME1Q9H400 295 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 SH2D2AQ9NP31 389 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 NSMCE4AQ9NXX6 385 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 SPRR3Q9UBC9 169 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 B4GALT7Q9UBV7 327 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 PCDHGB3Q9Y5G1 929 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 SPACA6W5XKT8 324 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 INTS1Q8N201 2190 aaKnown RBP12.81□□□□□ -0.36
CCDC84-208ENST00000534656 ZNF407Q9C0G0 2248 aa12.81□□□□□ -0.36
CCDC84-208ENST00000534656 RTCAO00442 366 aaKnown RBP12.8□□□□□ -0.36
CCDC84-208ENST00000534656 SYT5O00445 386 aa12.8□□□□□ -0.36
CCDC84-208ENST00000534656 RFPL3SP0C7P2 107 aa12.8□□□□□ -0.36
CCDC84-208ENST00000534656 COX7A2P14406 83 aa12.8□□□□□ -0.36
CCDC84-208ENST00000534656 HOXB4P17483 251 aaPredicted RBP12.8□□□□□ -0.36
CCDC84-208ENST00000534656 KLK2P20151 261 aa12.8□□□□□ -0.36
CCDC84-208ENST00000534656 HIST1H1TP22492 207 aaPredicted RBP12.8□□□□□ -0.36
CCDC84-208ENST00000534656 CPN2P22792 545 aa12.8□□□□□ -0.36
CCDC84-208ENST00000534656 PEX19P40855 299 aa12.8□□□□□ -0.36
CCDC84-208ENST00000534656 KIR2DL3P43628 341 aa12.8□□□□□ -0.36
CCDC84-208ENST00000534656 IGLV3-21P80748 117 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms