RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 NKAIN1Q4KMZ8 207 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 TAF1BQ53T94 588 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 EMC4Q5J8M3 183 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 TEX35Q5T0J7 233 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 UBAP2Q5T6F2 1119 aaKnown RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 FRMPD2BQ6IN97 320 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 LCN10Q6JVE6 187 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 RHBDD2Q6NTF9 364 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 LCTLQ6UWM7 567 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM47EQ6ZV65 393 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 TTLL10Q6ZVT0 673 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 TRMT10CQ7L0Y3 403 aaKnown RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 TAOK1Q7L7X3 1001 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CMC1Q7Z7K0 106 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 SYVN1Q86TM6 617 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 THOC6Q86W42 341 aaKnown RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 ANKRD13BQ86YJ7 626 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 GPSM1Q86YR5 675 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR4N4Q8N0Y3 316 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 TMCO5AQ8N6Q1 288 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CSNK1A1LQ8N752 337 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 ENDOVQ8N8Q3 282 aaKnown RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 EIF1ADQ8N9N8 165 aaKnown RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR56A3Q8NH54 315 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 GOT1L1Q8NHS2 421 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 STAG3L4Q8TBR4 150 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC44A1Q8WWI5 657 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 PYCR2Q96C36 320 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CABS1Q96KC9 395 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 MRGPRX4Q96LA9 322 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZNF285Q96NJ3 590 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 PRAP1Q96NZ9 151 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CATSPER2Q96P56 530 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 GBP5Q96PP8 586 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 RUFY1Q96T51 708 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 GPATCH1Q9BRR8 931 aaKnown RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 NLNQ9BYT8 704 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 ACTL8Q9H568 366 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CNOT10Q9H9A5 744 aaKnown RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 NMRAL1Q9HBL8 299 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CUTCQ9NTM9 273 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 PCDHGB4Q9UN71 923 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 FARSAQ9Y285 508 aaKnown RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 PADI2Q9Y2J8 665 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 ACOT9Q9Y305 439 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 LYVE1Q9Y5Y7 322 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 KCNE2Q9Y6J6 123 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 ACACAQ13085 2346 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 KMT2BQ9UMN6 2715 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 PKD1L2Q7Z442 2459 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CELSR3Q9NYQ7 3312 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ANKRD11Q6UB99 2663 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 PIKFYVEQ9Y2I7 2098 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 KCNE1BA0A087WTH5 132 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 A0A096LPK6 155 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 EXOC1LA0A1B0GW35 172 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 FEZF1A0PJY2 475 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 HMX2A2RU54 273 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 EIF4E1BA6NMX2 242 aaKnown RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 POC1B-GALNT4F8VUJ3 575 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 F8W735 103 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 RTCAO00442 366 aaKnown RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 TXNDC9O14530 226 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 DSCR3O14972 297 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 RIPK2O43353 540 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 KRT38O76015 456 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 MLYCDO95822 493 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CLEC3BP05452 202 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 C2P06681 752 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ABHD2P08910 425 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 LTA4HP09960 611 aaKnown RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CDH1P12830 882 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 TFEBP19484 476 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 TYK2P29597 1187 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 FOLR3P41439 243 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 GDF5P43026 501 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CCR10P46092 362 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 KCNJ5P48544 419 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 SERPINB9P50453 376 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CCR8P51685 355 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CLCN2P51788 898 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 PRKAA2P54646 552 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ALDH18A1P54886 795 aaKnown RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 RPS15AP62244 130 aaKnown RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 RPS18P62269 152 aaKnown RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CSNK1G2P78368 415 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 MEF2AQ02078 507 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 SEC23BQ15437 767 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 TGFBIQ15582 683 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 OR4D1Q15615 310 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 TBR1Q16650 682 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM83EQ2M2I3 478 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZXDCQ2QGD7 858 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 PRTGQ2VWP7 1150 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 DEFB109BQ30KR1 87 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM153CQ494X1 144 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 CDKL4Q5MAI5 379 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 ATP1A1-AS1Q5TC04 95 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 LGSNQ5TDP6 509 aa5.48□□□□□ -1.53
HMGB1P42-201ENST00000532126 GARNL3Q5VVW2 1013 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms