RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PDE7BQ9NP56 450 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 TEX10Q9NXF1 929 aaPredicted RBP13.64□□□□□ -0.23
TTC39A-216ENST00000530004 USP22Q9UPT9 525 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 CLCA2Q9UQC9 943 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 H0YGG7 62 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 EIF2S1P05198 315 aaKnown RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ZNF888P0CJ79 500 aaPredicted RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 CERS1P27544 350 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 SOX11P35716 441 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 MLLT3P42568 568 aaPredicted RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ARL4DP49703 201 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ARF3P61204 181 aaPredicted RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 MRPS22P82650 360 aaKnown RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 LRRC74AQ0VAA2 488 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 C16orf72Q14CZ0 275 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 CYP2R1Q6VVX0 501 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ZNF621Q6ZSS3 439 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ZCCHC7Q8N3Z6 543 aaKnown RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 DNAJC22Q8N4W6 341 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 FAM47BQ8NA70 645 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 OR4A15Q8NGL6 344 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 UTP15Q8TED0 518 aaKnown RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 DEPDC7Q96QD5 511 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 COPS7BQ9H9Q2 264 aaPredicted RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 STX18Q9P2W9 335 aaKnown RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ERVK-11Q9UQG0 969 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 AP3M1Q9Y2T2 418 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 URADA6NGE7 173 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ATP6V1B2P21281 511 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 HTR1EP28566 365 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 GABRA4P48169 554 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 OR4D2P58180 307 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 BTN3A2P78410 334 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 KCNAB1Q14722 419 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 MRM1Q6IN84 353 aaKnown RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 OR10A6Q8NH74 314 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ZCCHC10Q8TBK6 192 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ADAMTS14Q8WXS8 1223 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 RSRC1Q96IZ7 334 aaKnown RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 LRGUKQ96M69 825 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 TRIM15Q9C019 465 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 KAT8Q9H7Z6 458 aaKnown RBP13.63□□□□□ -0.23
TTC39A-216ENST00000530004 ACTR3BQ9P1U1 418 aa13.63□□□□□ -0.23
TTC39A-216ENST00000530004 PIEZO1Q92508 2521 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 DMXL1Q9Y485 3027 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 TMX2-CTNND1H3BSU7 103 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 ARPC2O15144 300 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 HCRTR1O43613 425 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 TBX19O60806 448 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 CSO75390 466 aaKnown RBP13.62□□□□□ -0.23
TTC39A-216ENST00000530004 BAG2O95816 211 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 C6orf47O95873 294 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 ABCB1P08183 1280 aaPredicted RBP13.62□□□□□ -0.23
TTC39A-216ENST00000530004 ANPEPP15144 967 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 DDX5P17844 614 aaKnown RBP13.62□□□□□ -0.23
TTC39A-216ENST00000530004 CSTF2P33240 577 aaKnown RBP eCLIP13.62□□□□□ -0.23
TTC39A-216ENST00000530004 SESN3P58005 492 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 DEFB110Q30KQ9 67 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 ZC3H12BQ5HYM0 836 aaKnown RBP13.62□□□□□ -0.23
TTC39A-216ENST00000530004 TMTC4Q5T4D3 741 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 NDUFAF5Q5TEU4 345 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 FAM180BQ6P0A1 224 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 TMPRSS12Q86WS5 348 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 PTRH1Q86Y79 214 aaKnown RBP13.62□□□□□ -0.23
TTC39A-216ENST00000530004 CACTIN-AS1Q8N1I8 211 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 ZNF655Q8N720 491 aaPredicted RBP13.62□□□□□ -0.23
TTC39A-216ENST00000530004 AGBL5Q8NDL9 886 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 ZNF583Q96ND8 569 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 FAIM2Q9BWQ8 316 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 MUC13Q9H3R2 512 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 C5AR2Q9P296 337 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 VPS4AQ9UN37 437 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 PCDHGB4Q9UN71 923 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 ASB4Q9Y574 426 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 SNX13Q9Y5W8 968 aa13.62□□□□□ -0.23
TTC39A-216ENST00000530004 COL27A1Q8IZC6 1860 aaPredicted RBP13.62□□□□□ -0.23
TTC39A-216ENST00000530004 MDC1Q14676 2089 aaKnown RBP13.62□□□□□ -0.23
TTC39A-216ENST00000530004 CNOT1A5YKK6 2376 aaKnown RBP13.61□□□□□ -0.23
TTC39A-216ENST00000530004 A0A1W2PRB8 838 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 EVPLLA8MZ36 301 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 AGRPO00253 132 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 CLIC1O00299 241 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 ZSCAN9O15535 394 aaPredicted RBP13.61□□□□□ -0.23
TTC39A-216ENST00000530004 GUCY1B2O75343 617 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 SCELO95171 688 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 C1QCP02747 245 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 C8BP07358 591 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 MSL3P1P0C860 447 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 SMIM10L1P0DMW3 83 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 DRD2P14416 443 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 FOLR1P15328 257 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 NCK1P16333 377 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 VSX2P58304 361 aaPredicted RBP13.61□□□□□ -0.23
TTC39A-216ENST00000530004 SNRPNP63162 240 aaKnown RBP13.61□□□□□ -0.23
TTC39A-216ENST00000530004 HBA1P69905 142 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 SLC34A1Q06495 639 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 GAB1Q13480 694 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 FXNQ16595 210 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 LCN8Q6JVE9 175 aa13.61□□□□□ -0.23
TTC39A-216ENST00000530004 ABHD13Q7L211 337 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms