RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 OR9Q1Q8NGQ5 310 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SETD6Q8TBK2 473 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 ADAMTS19Q8TE59 1207 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 HERVK_113Q902F9 699 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SCRN2Q96FV2 425 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 OPALINQ96PE5 141 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 POLR2J2Q9GZM3 115 aaKnown RBP11.94□□□□□ -0.5
CAPN1-208ENST00000527323 NMNAT1Q9HAN9 279 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-208ENST00000527323 PLSCR3Q9NRY6 295 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 A0A1W2PQ09 198 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SERTM1A2A2V5 107 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 CCDC182A6NF36 153 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 AGAP14A8MT82 685 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 NOTOA8MTQ0 251 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF197O14709 1029 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SLC16A5O15375 505 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 RHOP08100 348 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 IL7P13232 177 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 LHCGRP22888 699 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 RFX2P48378 723 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 LIMK1P53667 647 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 TEKQ02763 1124 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SCN1BQ07699 218 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 MESP2Q0VG99 397 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SP140Q13342 867 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SPHARQ15513 63 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 PLEKHS1Q5SXH7 462 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 KLHL17Q6TDP4 642 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 MAMSTRQ6ZN01 415 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 C11orf96Q7Z7L8 435 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 OR7G3Q8NG95 312 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 ASZ1Q8WWH4 475 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SCAMP4Q969E2 229 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 CIDECQ96AQ7 238 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-208ENST00000527323 BARHL1Q9BZE3 327 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SUV39H2Q9H5I1 410 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 ZDHHC6Q9H6R6 413 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 HHATLQ9HCP6 504 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 NUFIP1Q9UHK0 495 aaKnown RBP11.94□□□□□ -0.5
CAPN1-208ENST00000527323 TMCC3Q9ULS5 477 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SSR3Q9UNL2 185 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 TRAPPC4Q9Y296 219 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 KIAA1671Q9BY89 1806 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TLR4O00206 839 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 RNASET2O00584 256 aaKnown RBP11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TMCC2O75069 709 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 CSF2P04141 144 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 PTPN5P54829 565 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 C2orf80Q0P641 193 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 SYTL3Q4VX76 610 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 PDZK1Q5T2W1 519 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 OR52N2Q8NGI0 321 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 ASB15Q8WXK1 588 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 MRPS31Q92665 395 aaKnown RBP11.93□□□□□ -0.5
CAPN1-208ENST00000527323 COQ8BQ96D53 544 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 MAPRE3Q9UPY8 281 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 ARHGEF33A8MVX0 844 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 UGDHO60701 494 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TNFRSF21O75509 655 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 CDRT1O95170 752 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 IFNW1P05000 195 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 SCG5P05408 212 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 FHP07954 510 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TIA1P31483 386 aaKnown RBP eCLIP11.93□□□□□ -0.51e-10■□□□□ 11.1
CAPN1-208ENST00000527323 DDOSTP39656 456 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 SNRPD1P62314 119 aaKnown RBP11.93□□□□□ -0.5
CAPN1-208ENST00000527323 SLAMF1Q13291 335 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 DOC2BQ14184 412 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 CCSMST1Q4G0I0 132 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TOR1AIP1Q5JTV8 583 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 SNAP47Q5SQN1 464 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 IER5LQ5T953 404 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 GRHL2Q6ISB3 625 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TMPRSS11BQ86T26 416 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TMEM25Q86YD3 366 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 SFTPA1Q8IWL2 248 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TRIM48Q8IWZ4 208 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TCEAL8Q8IYN2 117 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 KLHL6Q8WZ60 621 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 TMEM203Q969S6 136 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 PPCDCQ96CD2 204 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 LRRC3BQ96PB8 259 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 REEP4Q9H6H4 257 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 SLC28A3Q9HAS3 691 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 ASAH2Q9NR71 780 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 AP1M2Q9Y6Q5 423 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 ENPP4Q9Y6X5 453 aa11.93□□□□□ -0.5
CAPN1-208ENST00000527323 HMX3A6NHT5 357 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 KPNA5O15131 536 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 AP2A2O94973 939 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CSTF2P33240 577 aaKnown RBP eCLIP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CTSOP43234 321 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 XCR1P46094 333 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CD83Q01151 205 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 LMAN2Q12907 356 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 SPIN4Q56A73 249 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.92□□□□□ -0.5
CAPN1-208ENST00000527323 LIPKQ5VXJ0 399 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 CHTF18Q8WVB6 975 aa11.92□□□□□ -0.5
CAPN1-208ENST00000527323 TMEM80Q96HE8 168 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms