RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 UFM1P61960 85 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 GINS1Q14691 196 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 SFT2D3Q587I9 215 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 RNASE10Q5GAN6 216 aaKnown RBP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 ARHGAP40Q5TG30 622 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 KDELC1Q6UW63 502 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 C10orf82Q8WW14 230 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 GCDHQ92947 438 aaPredicted RBP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 DNMT3AQ9Y6K1 912 aaPredicted RBP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 IRF6O14896 467 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 F7P08709 466 aaPredicted RBP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 RPL10P27635 214 aaKnown RBP13.18□□□□□ -0.3
LRRK1-202ENST00000525284 RAB30Q15771 203 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 ITPRIPL2Q3MIP1 535 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 PRAMEF14Q5SWL7 426 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 BANPQ8N9N5 519 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 OR1S1Q8NH92 325 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 B3GNT2Q9NY97 397 aa13.18□□□□□ -0.3
LRRK1-202ENST00000525284 NTSR2O95665 410 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 STT3AP46977 705 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 CRHR2Q13324 411 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 LINC00116Q8NCU8 138 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 PSMG2Q969U7 264 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 SDCBP2Q9H190 292 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TMEM9Q9P0T7 183 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 CNOT11Q9UKZ1 510 aaKnown RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 PRICKLE3O43900 615 aaPredicted RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 LCMT2O60294 686 aaKnown RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 OXTRP30559 389 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 HOXC8P31273 242 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 ZNF84P51523 738 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TAS2R20P59543 309 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 NKPD1Q17RQ9 610 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 BAIAP2L2Q6UXY1 529 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 GID4Q8IVV7 300 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 C16orf78Q8WTQ4 265 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 OR4K3Q96R72 315 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 CARS2Q9HA77 564 aaKnown RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 FOLH1BQ9HBA9 442 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TDP1Q9NUW8 608 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TAC3Q9UHF0 121 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 PCDHB11Q9Y5F2 797 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 GXYLT2A0PJZ3 443 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TMEM233B4DJY2 109 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 HNF1BP35680 557 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 ASPAP45381 313 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TMEM164Q5U3C3 297 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 OR52W1Q6IF63 320 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 SLC7A5P1Q8MH63 180 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 ELMOD3Q96FG2 381 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 CMTM7Q96FZ5 175 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 LURAP1Q96LR2 239 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 PATZ1Q9HBE1 687 aaKnown RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 IGSF9Q9P2J2 1179 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 SLC17A6Q9P2U8 582 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 HCN4Q9Y3Q4 1203 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 MTMR11A4FU01 709 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 OR51F1A6NGY5 319 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 KIAA0513O60268 411 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 SC5DO75845 299 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 IMPDH1P20839 514 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 THBS2P35442 1172 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 KCTD20Q7Z5Y7 419 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 SLC43A2Q8N370 569 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TMEM125Q96AQ2 219 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 CCDC74BQ96LY2 380 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 CACNG6Q9BXT2 260 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 SMIM3Q9BZL3 60 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 DIP2CQ9Y2E4 1556 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TRBV2A0A0J9YWF9 115 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 C17orf113A0A1B0GUU1 675 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 CBY3A6NI87 242 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 HAS3O00219 553 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 C6orf47O95873 294 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 RIDAP52758 137 aaKnown RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 KCNC4Q03721 635 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 TRAM1Q15629 374 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 CYBRD1Q53TN4 286 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 USP51Q70EK9 711 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 RNF130Q86XS8 419 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 HOXB13Q92826 284 aaPredicted RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 PTGES2Q9H7Z7 377 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 SSU72Q9NP77 194 aaKnown RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 DNAJB4Q9UDY4 337 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 ZNF230Q9UIE0 474 aaPredicted RBP13.17□□□□□ -0.3
LRRK1-202ENST00000525284 CPQQ9Y646 472 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
LRRK1-202ENST00000525284 ANGPTL7O43827 346 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 CAP1Q01518 475 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 ID2Q02363 134 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 KCNIP4Q6PIL6 250 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 IRF2BP2Q7Z5L9 587 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 TOMM40LQ969M1 308 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 MRPL38Q96DV4 380 aaKnown RBP13.16□□□□□ -0.3
LRRK1-202ENST00000525284 EFCAB11Q9BUY7 163 aa13.16□□□□□ -0.3
LRRK1-202ENST00000525284 TXNL4BQ9NX01 149 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms