RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	NUDT6	P53370	316 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	AIF1	P55008	147 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	ATP5I	P56385	69 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	CARD18	P57730	90 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	ROR2	Q01974	943 aa	Known RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	HSF2	Q03933	536 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	TROAP	Q12815	778 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	TRDN	Q13061	729 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	ITGAD	Q13349	1161 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	NEDD9	Q14511	834 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	PDIA5	Q14554	519 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	RFTN1	Q14699	578 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	MANEA	Q5SRI9	462 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	PRAMEF20	Q5VT98	475 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	FAM46C	Q5VWP2	391 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	SIGLEC15	Q6ZMC9	328 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	TPRG1	Q6ZUI0	275 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	PHLDB2	Q86SQ0	1253 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	MISP	Q8IVT2	679 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	LAX1	Q8IWV1	398 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	FBXL14	Q8N1E6	418 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	ZNF611	Q8N823	705 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	BCORP1	Q8N888	145 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	BHLHE23	Q8NDY6	225 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	STKLD1	Q8NE28	680 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	FAM71C	Q8NEG0	241 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	VANGL1	Q8TAA9	524 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	SYN2	Q92777	582 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	TAF15	Q92804	592 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	INPP5D	Q92835	1189 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	APBB2	Q92870	758 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	PEX13	Q92968	403 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	C19orf60	Q96EN9	201 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	C4orf36	Q96KX1	117 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	SLC22A12	Q96S37	553 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	PCYT2	Q99447	389 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	GAL3ST1	Q99999	423 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	MTG1	Q9BT17	334 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	FNDC11	Q9BVV2	318 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	CUEDC2	Q9H467	287 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	PPP1R3E	Q9H7J1	279 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	SEBOX	Q9HB31	216 aa	Predicted RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	VAT1L	Q9HCJ6	419 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356		Q9N2K0	584 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	YAE1D1	Q9NRH1	226 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	AGPAT5	Q9NUQ2	364 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	EXOC1	Q9NV70	894 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	TBC1D13	Q9NVG8	400 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	GAR1	Q9NY12	217 aa	Known RBP	3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	MMP24	Q9Y5R2	645 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	ECM29	Q5VYK3	1845 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	CACNA1H	O95180	2353 aa		3.99	□□□□□ -1.77
PCM1-223	ENST00000524356	ARAP2	Q8WZ64	1704 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	UMODL1	Q5DID0	1318 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	TPR	P12270	2363 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	TRBV5-7	A0A0A0MS05	114 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356		A0A0U1RQS6	177 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	LOC100653049	A0A140TA62	436 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	TMEM89	A2RUT3	159 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	ACOD1	A6NK06	481 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356		F8W810	466 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	NDUFS8	O00217	210 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	CETN3	O15182	167 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	SLC22A2	O15244	555 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	OGT	O15294	1046 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	DCX	O43602	365 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	B4GALT2	O60909	372 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	LRP3	O75074	770 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	ATP6V1G1	O75348	118 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	VPS26A	O75436	327 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	KRT34	O76011	436 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	MFN2	O95140	757 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	LUC7L3	O95232	432 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	CSF2	P04141	144 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	CYP1A2	P05177	515 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	HOXC6	P09630	235 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	NUDT17	P0C025	328 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	UBTFL6	P0CB48	400 aa	Predicted RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	STAG3L3	P0CL85	134 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	TFPI	P10646	304 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	KRT3	P12035	628 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	HOXB2	P14652	356 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	ST6GAL1	P15907	406 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	HRH2	P25021	359 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	ELAVL4	P26378	380 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	ADORA1	P30542	326 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	RFC2	P35250	354 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	SLC1A3	P43003	542 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	RFX5	P48382	616 aa	Predicted RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	PEX5	P50542	639 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	METAP2	P50579	478 aa	Known RBP eCLIP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	BACE1	P56817	501 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	EIF3E	P60228	445 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	DSC1	Q08554	894 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	FUT7	Q11130	342 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	NR1D2	Q14995	579 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	EIF2S3L	Q2VIR3	472 aa	Known RBP	3.98	□□□□□ -1.77
PCM1-223	ENST00000524356		Q5PR19	223 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	SIGIRR	Q6IA17	410 aa		3.98	□□□□□ -1.77
PCM1-223	ENST00000524356	MFSD12	Q6NUT3	480 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms