RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 VPS41P49754 854 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 RAB38P57729 211 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 RAB8AP61006 207 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 RNF4P78317 190 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 BASP1P80723 227 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 CBLBQ13191 982 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 NAE1Q13564 534 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 SF3B4Q15427 424 aaKnown RBP eCLIP7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 MPEG1Q2M385 716 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 ZNF791Q3KP31 576 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 NHSL2Q5HYW2 709 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 ZNF470Q6ECI4 717 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 ZNF549Q6P9A3 640 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 PODNL1Q6PEZ8 512 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 LYPD8Q6UX82 237 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 CTAGE6Q86UF2 777 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 ZNF595Q8IYB9 648 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 CPNE9Q8IYJ1 553 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 DND1Q8IYX4 353 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 RASGEF1CQ8N431 466 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 LIX1Q8N485 282 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 TMEM52Q8NDY8 209 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 TRPV3Q8NET8 790 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 TRIM58Q8NG06 486 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 NUBPLQ8TB37 319 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 TMEM158Q8WZ71 300 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 DAZLQ92904 295 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 SPACA9Q96E40 222 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 PERPQ96FX8 193 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 CAPZA3Q96KX2 299 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 ZFP3Q96NJ6 502 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 OR4K3Q96R72 315 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 GPR21Q99679 349 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 SFXN3Q9BWM7 321 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 RHBGQ9H310 441 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 PELI2Q9HAT8 420 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 PARVBQ9HBI1 364 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 PROK2Q9HC23 129 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 PRTFDC1Q9NRG1 225 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 GALNT8Q9NY28 637 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 ADAMTS6Q9UKP5 1117 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 EIF3LQ9Y262 564 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 MRPS33Q9Y291 106 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 IKBKGQ9Y6K9 419 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 MED12Q93074 2177 aa7.71□□□□□ -1.18
CTNNA1-215ENST00000519309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.7□□□□□ -1.182e-14■■■□□ 16.4
CTNNA1-215ENST00000519309 DEFB108AA8MXU0 73 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 CTIFO43310 598 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 SOX30O94993 753 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 CNOT4O95628 575 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 SERPIND1P05546 499 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 PTH2RP49190 550 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 KCNJ2P63252 427 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 DMTNQ08495 405 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 SLC13A2Q13183 592 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 DUSP8Q13202 625 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 ACKR1Q16570 336 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 PHKG1Q16816 387 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 SLC22A10Q63ZE4 541 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 DUPD1Q68J44 220 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 VASNQ6EMK4 673 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 HEPHL1Q6MZM0 1159 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 NEPROQ6NW34 567 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 GSTA5Q7RTV2 222 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 CAND1Q86VP6 1230 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 SLC35F6Q8N357 371 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 OR5L2Q8NGL0 311 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 PTPMT1Q8WUK0 201 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 SLC5A11Q8WWX8 675 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 NEIL2Q969S2 332 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 KIAA1191Q96A73 305 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 SNF8Q96H20 258 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 ZNF597Q96LX8 424 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 TIMP4Q99727 224 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 RBM24Q9BX46 236 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 CCDC68Q9H2F9 335 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 UBQLN3Q9H347 655 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 KLHL31Q9H511 634 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 VTI1BQ9UEU0 232 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 CHCHD2Q9Y6H1 151 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 CLCA3PQ9Y6N3 262 aa7.7□□□□□ -1.18
CTNNA1-215ENST00000519309 C15orf38-AP3S2A0A0A6YYH1 394 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 CYR61O00622 381 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 NRDCO43847 1150 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 TMCC2O75069 709 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 TRIM3O75382 744 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 ERN1O75460 977 aaKnown RBP7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 IFNA2P01563 188 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 HPNP05981 417 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 PAMP19021 973 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 TPSB2P20231 275 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 GDF1P27539 372 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 SLC1A2P43004 574 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 MAGEA6P43360 314 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 RGS4P49798 205 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 AP1S2P56377 157 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 STXBP1P61764 594 aaKnown RBP7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 CDK16Q00536 496 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 GPS1Q13098 491 aa7.69□□□□□ -1.18
CTNNA1-215ENST00000519309 RUNX2Q13950 521 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms