RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LPAR1Q92633 364 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SLCO2A1Q92959 643 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 TSACCQ96A04 125 aaPredicted RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 FUBP1Q96AE4 644 aaKnown RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF775Q96BV0 537 aaPredicted RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SIGLEC10Q96LC7 697 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 INPP4AQ96PE3 977 aaPredicted RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CMKLR1Q99788 373 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SH3GL1Q99961 368 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 OMDQ99983 421 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 UQCC2Q9BRT2 126 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ST6GALNAC5Q9BVH7 336 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ROGDIQ9GZN7 287 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SLITRK6Q9H5Y7 841 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 POLE4Q9NR33 117 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 MIS18AQ9NYP9 233 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 AHSPQ9NZD4 102 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 LHX3Q9UBR4 397 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 EPHA6Q9UF33 1036 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 MTRF1LQ9UGC7 380 aaKnown RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CD300AQ9UGN4 299 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 MRTO4Q9UKD2 239 aaKnown RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF490Q9ULM2 529 aaPredicted RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 PADI3Q9ULW8 664 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 BARX2Q9UMQ3 279 aaPredicted RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 GAB2Q9UQC2 676 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CA5BQ9Y2D0 317 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 RHBDD3Q9Y3P4 386 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 RNF115Q9Y4L5 304 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 KLF2Q9Y5W3 355 aaPredicted RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ATP10DQ9P241 1426 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 INSRP06213 1382 aa3.65□□□□□ -1.82
RNU4-60P-201ENST00000517239 LOC105371242A0A075B767 164 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 A0A0J9YYE9 177 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 A0A1W2PPV4 95 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SMCO3A2RU48 225 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 MANSC4A6NHS7 340 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 IQCF5A8MTL0 148 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 POC1B-GALNT4F8VUJ3 575 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 CLDN5O00501 218 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 POLR1CO15160 346 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 DUX1O43812 170 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 GPR137BO60478 399 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZIC3O60481 467 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM20BO75063 409 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SEMA7AO75326 666 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 BMP10O95393 424 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 TXNDC12O95881 172 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ECDO95905 644 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 TRBC1P01850 177 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 RAF1P04049 648 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ITGAMP11215 1152 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 CPN1P15169 458 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 PSMA2P25787 234 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SSTR4P31391 388 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 HNRNPH1P31943 449 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 CASP14P31944 242 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 DUTP33316 252 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SFTPDP35247 375 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 NAMPTP43490 491 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ACADSBP45954 432 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 GPR4P46093 362 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 NPY2RP49146 381 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 CCR4P51679 360 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 MYL6P60660 151 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 RAB11AP62491 216 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 GUCY1B3Q02153 619 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 DMPKQ09013 629 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SLAQ13239 276 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 CRHR2Q13324 411 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 GPR176Q14439 515 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 HEPACAMQ14CZ8 416 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 EXOSC7Q15024 291 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 RAB11BQ15907 218 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 EXT1Q16394 746 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SYPL1Q16563 259 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 PHLDA2Q53GA4 152 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 TEX44Q53QW1 395 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ELFN2Q5R3F8 820 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 LCE2AQ5TA79 106 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 C20orf194Q5TEA3 1177 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF787Q6DD87 383 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 SNRNP48Q6IEG0 339 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR2A2Q6IF42 318 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR7E24Q6IFN5 339 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 TCTN3Q6NUS6 607 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 DOK6Q6PKX4 331 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 DBX2Q6ZNG2 339 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 TRMT1LQ7Z2T5 733 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 CPEB2Q7Z5Q1 589 aaKnown RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 PRUNE1Q86TP1 453 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 MAP7D3Q8IWC1 876 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 FOXRED2Q8IWF2 684 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 ZNF444Q8N0Y2 327 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 MUC20Q8N307 709 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 NPEPL1Q8NDH3 523 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 FAM83FQ8NEG4 500 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 BHLHE22Q8NFJ8 381 aaPredicted RBP3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR1L4Q8NGR5 311 aa3.65□□□□□ -1.83
RNU4-60P-201ENST00000517239 OR13J1Q8NGT2 312 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms