RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 LIMS1P48059 325 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FLT3LGP49771 235 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LIMK1P53667 647 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MAPK12P53778 367 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ATP12AP54707 1039 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 WNT3P56703 355 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ST8SIA6P61647 398 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 WDR5P61964 334 aaKnown RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TBPL1P62380 186 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 YBX1P67809 324 aaKnown RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 HBA1P69905 142 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PRR5P85299 388 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PITPNAQ00169 270 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CHRNEQ04844 493 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PIGFQ07326 219 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TGM3Q08188 693 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ACSM1Q08AH1 577 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 POU4F2Q12837 409 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LMAN2Q12907 356 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC13A2Q13183 592 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MAB21L1Q13394 359 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ADAM15Q13444 863 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GAB1Q13480 694 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 NAE1Q13564 534 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GPR50Q13585 617 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RIN1Q13671 783 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DDX39BQ13838 428 aaKnown RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 NFE2L1Q14494 772 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SF3A2Q15428 464 aaKnown RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SMN1Q16637 294 aaKnown RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TSTQ16762 297 aaKnown RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LRRC26Q2I0M4 334 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 C18orf21Q32NC0 220 aaPredicted RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 EML3Q32P44 896 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 INAVAQ3KP66 663 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TRIM60Q495X7 471 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PLK5Q496M5 336 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MINDY4Q4G0A6 757 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ATP13A5Q4VNC0 1218 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GPAT3Q53EU6 434 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TMEM35AQ53FP2 167 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 KLHL12Q53G59 568 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DGKKQ5KSL6 1271 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PRAMEF14Q5SWL7 426 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC35F1Q5T1Q4 408 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SPOUT1Q5T280 376 aaKnown RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ATAD3CQ5T2N8 411 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 HENMT1Q5T8I9 393 aaKnown RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PRAMEF13Q5VWM6 474 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SAXO2Q658L1 398 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 C12orf73Q69YU5 71 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FRMPD2BQ6IN97 320 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LCTLQ6UWM7 567 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FAM131AQ6UXB0 335 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PAMR1Q6UXH9 720 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CEACAM20Q6UY09 585 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TMEM64Q6YI46 380 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ZNF782Q6ZMW2 699 aaPredicted RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLCO4C1Q6ZQN7 724 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CREB3L2Q70SY1 520 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RRM2BQ7LG56 351 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 COMMD6Q7Z4G1 85 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 BTLAQ7Z6A9 289 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ADGRD2Q7Z7M1 963 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DSG4Q86SJ6 1040 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LUZP2Q86TE4 346 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ZBTB46Q86UZ6 589 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FAM124AQ86V42 546 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ATCAYQ86WG3 371 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 C17orf64Q86WR6 236 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LIX1LQ8IVB5 337 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DCUN1D3Q8IWE4 304 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GPALPP1Q8IXQ4 340 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ADGRG2Q8IZP9 1017 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CLECL1Q8IZS7 167 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FAM109AQ8N4B1 249 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 KLHL36Q8N4N3 616 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FAM26EQ8N5C1 309 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 NANOGP1Q8N7R0 232 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLAIN1Q8ND83 568 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GPR26Q8NDV2 337 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PSD4Q8NDX1 1056 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 OR56A1Q8NGH5 318 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 OR6F1Q8NGZ6 308 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 NFKBIDQ8NI38 313 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ANGPTL6Q8NI99 470 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SUN3Q8TAQ9 357 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LKAAEAR1Q8TD35 194 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 HAVCR2Q8TDQ0 301 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GPR152Q8TDT2 470 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SH3RF2Q8TEC5 729 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 C15orf40Q8WUR7 153 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC5A11Q8WWX8 675 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DEDD2Q8WXF8 326 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ASB15Q8WXK1 588 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SMG7Q92540 1137 aaKnown RBP3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 THRSPQ92748 146 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 OSTF1Q92882 214 aa3.22□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GLYATL1Q969I3 302 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms