RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 ABCB7O75027 752 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 PRKRAO75569 313 aaKnown RBP12.35□□□□□ -0.43
PFDN1-206ENST00000514611 SCELO95171 688 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 ETHE1O95571 254 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 LTA4HP09960 611 aaKnown RBP12.35□□□□□ -0.43
PFDN1-206ENST00000514611 MTHFD2P13995 350 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 CASQ1P31415 396 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 CASP2P42575 452 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 KIR3DL1P43629 444 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 UBAP2Q5T6F2 1119 aaKnown RBP12.35□□□□□ -0.43
PFDN1-206ENST00000514611 GRHL2Q6ISB3 625 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 SYT10Q6XYQ8 523 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 OR4N5Q8IXE1 308 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 RPRMLQ8N4K4 120 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 MORN4Q8NDC4 146 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 OR2M7Q8NG81 312 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 OR7G3Q8NG95 312 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 UBE2E3Q969T4 207 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 ANKRD9Q96BM1 317 aaPredicted RBP12.35□□□□□ -0.43
PFDN1-206ENST00000514611 SDCCAG3Q96C92 435 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 MRRFQ96E11 262 aaKnown RBP12.35□□□□□ -0.43
PFDN1-206ENST00000514611 TBCDQ9BTW9 1192 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 ROGDIQ9GZN7 287 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 NMRAL1Q9HBL8 299 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 PLSCR2Q9NRY7 297 aa12.35□□□□□ -0.43
PFDN1-206ENST00000514611 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
PFDN1-206ENST00000514611 HMX2A2RU54 273 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 SYNDIG1LA6NDD5 238 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 LRRC14BA6NHZ5 514 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 PLPP1O14494 284 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 TNNI3P19429 210 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 CPN2P22792 545 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 CRABP2P29373 138 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 RNF4P78317 190 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 SLC7A5Q01650 507 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 PLGLB1Q02325 96 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 CAV1Q03135 178 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 NAB1Q13506 487 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 SERTAD2Q14140 314 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 ZNF750Q32MQ0 723 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 TMEM35AQ53FP2 167 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 MROH9Q5TGP6 573 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 KHDRBS2Q5VWX1 349 aaKnown RBP12.34□□□□□ -0.43
PFDN1-206ENST00000514611 DGAT2L6Q6ZPD8 337 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 MYLK4Q86YV6 388 aaPredicted RBP12.34□□□□□ -0.43
PFDN1-206ENST00000514611 GPALPP1Q8IXQ4 340 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 ZNF295-AS1Q8N0V1 137 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 TEX9Q8N6V9 391 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 SRFBP1Q8NEF9 429 aaKnown RBP12.34□□□□□ -0.43
PFDN1-206ENST00000514611 HUS1BQ8NHY5 278 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 DOK4Q8TEW6 326 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 ZNF721Q8TF20 911 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 SCYL1Q96KG9 808 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 LURAP1Q96LR2 239 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 MTERF1Q99551 399 aaKnown RBP12.34□□□□□ -0.43
PFDN1-206ENST00000514611 TTTY12Q9BZ98 90 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 DEFB127Q9H1M4 99 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 DMRT3Q9NQL9 472 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 LIPGQ9Y5X9 500 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 SPACA6W5XKT8 324 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 ABCA12Q86UK0 2595 aa12.34□□□□□ -0.43
PFDN1-206ENST00000514611 APCP25054 2843 aa12.33□□□□□ -0.43
PFDN1-206ENST00000514611 OTOGQ6ZRI0 2925 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 ACOT7O00154 380 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 HRKO00198 91 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 C2P06681 752 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 EPB42P16452 691 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 RAP1GDS1P52306 607 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 HNRNPH2P55795 449 aaKnown RBP12.33□□□□□ -0.44
PFDN1-206ENST00000514611 RPS13P62277 151 aaKnown RBP12.33□□□□□ -0.44
PFDN1-206ENST00000514611 PPIAP62937 165 aaKnown RBP12.33□□□□□ -0.44
PFDN1-206ENST00000514611 TNFRSF17Q02223 184 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 GUCY2DQ02846 1103 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 SLAMF1Q13291 335 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 SETDB1Q15047 1291 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 UAP1Q16222 522 aaPredicted RBP12.33□□□□□ -0.44
PFDN1-206ENST00000514611 AP5B1Q2VPB7 878 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 DEPDC1Q5TB30 811 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 C18orf63Q68DL7 685 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 OR4C11Q6IEV9 310 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 ARHGAP11AQ6P4F7 1023 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 CEP128Q6ZU80 1094 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 CHSY3Q70JA7 882 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 C9orf40Q8IXQ3 194 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 EID3Q8N140 333 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 CA5BP1Q8WTZ4 195 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 PPWD1Q96BP3 646 aaKnown RBP12.33□□□□□ -0.44
PFDN1-206ENST00000514611 CMTM7Q96FZ5 175 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 DGAT2Q96PD7 388 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 ZNF717Q9BY31 904 aaPredicted RBP12.33□□□□□ -0.44
PFDN1-206ENST00000514611 ZDHHC11Q9H8X9 412 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 SNX15Q9NRS6 342 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 COPS7AQ9UBW8 275 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 ACOT9Q9Y305 439 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 DCHS2Q6V1P9 2916 aa12.33□□□□□ -0.44
PFDN1-206ENST00000514611 A0A087X1B8 175 aa12.32□□□□□ -0.44
PFDN1-206ENST00000514611 SYCE1LA8MT33 242 aa12.32□□□□□ -0.44
PFDN1-206ENST00000514611 CCL3P10147 92 aa12.32□□□□□ -0.44
PFDN1-206ENST00000514611 GFAPP14136 432 aa12.32□□□□□ -0.44
PFDN1-206ENST00000514611 ELAVL4P26378 380 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms