RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 OR6F1Q8NGZ6 308 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 CFAP36Q96G28 342 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 ALKBH3Q96Q83 286 aaPredicted RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 CCDC28BQ9BUN5 200 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 ACAT2Q9BWD1 397 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 WWP1Q9H0M0 922 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 DPEP3Q9H4B8 488 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 WDR41Q9HAD4 459 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 GPN1Q9HCN4 374 aaPredicted RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 UBE2TQ9NPD8 197 aaPredicted RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 ZCCHC3Q9NUD5 404 aaKnown RBP4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 SNX5Q9Y5X3 404 aa4.18□□□□□ -1.74
HMGCS1-207ENST00000514610 TRIM64A6NGJ6 449 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 TRIM64BA6NI03 449 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNF724A8MTY0 619 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 DDX39AO00148 427 aaKnown RBP4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 SLC28A1O00337 649 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 GMNNO75496 209 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 CSDE1O75534 798 aaKnown RBP4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 OR6B1O95007 311 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 CXCL14O95715 111 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 TBX6O95947 436 aaPredicted RBP4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 PNPP00491 289 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 GSTA2P09210 222 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 ADORA3P0DMS8 318 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 CT45A8P0DMV1 189 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 CT45A9P0DMV2 189 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 PEX3P56589 373 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 KCNK10P57789 538 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 ITPK1Q13572 414 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 CT45A2Q5DJT8 189 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 PLBD1Q6P4A8 553 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 OR4L1Q8NH43 312 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 GLYATL1Q969I3 302 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 MRPL24Q96A35 216 aaKnown RBP4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 CXorf58Q96LI9 332 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 SPATA13Q96N96 652 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 TAAR6Q96RI8 345 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 TNFRSF13CQ96RJ3 184 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 RAB40CQ96S21 281 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 DCLRE1BQ9H816 532 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 KCNMB3Q9NPA1 279 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 DDX28Q9NUL7 540 aaKnown RBP4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 APPL1Q9UKG1 709 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 KLK13Q9UKR3 277 aa4.17□□□□□ -1.74
HMGCS1-207ENST00000514610 LOC390937A0A1W2PQ73 354 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 TLR4O00206 839 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 CCSO14618 274 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 POP4O95707 220 aaKnown RBP4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 FHP07954 510 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 P4HA1P13674 534 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 OXTRP30559 389 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 ID1P41134 155 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 ZFP36L2P47974 494 aaKnown RBP4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 RPL27P61353 136 aaKnown RBP4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 SIX1Q15475 284 aaPredicted RBP4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 DCAF12Q5T6F0 453 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 B3GLCTQ6Y288 498 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 STXBP4Q6ZWJ1 553 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 ITIH5Q86UX2 942 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 C17orf64Q86WR6 236 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 TBC1D10CQ8IV04 446 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 ABHD12Q8N2K0 398 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNRF1Q8ND25 227 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 PSMA8Q8TAA3 256 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 MGARPQ8TDB4 240 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 NPRL2Q8WTW4 380 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 DTD2Q96FN9 168 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNF597Q96LX8 424 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNF577Q9BSK1 485 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 TUBB1Q9H4B7 451 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 NMUR1Q9HB89 426 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 PRMT8Q9NR22 394 aaPredicted RBP4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 DEPPQ9NTK1 212 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 COMMD8Q9NX08 183 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 NIP7Q9Y221 180 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 MOB4Q9Y3A3 225 aa4.16□□□□□ -1.74
HMGCS1-207ENST00000514610 TDRD15B5MCY1 1934 aaKnown RBP4.15□□□□□ -1.74
HMGCS1-207ENST00000514610 FBP2O00757 339 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 OGTO15294 1046 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 OR6A2O95222 327 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 TXNDC12O95881 172 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 MMP10P09238 476 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 TPBGLP0DKB5 382 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 RPL9P32969 192 aaKnown RBP4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 CAPGP40121 348 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 MTIF2P46199 727 aaKnown RBP4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 PRELPP51888 382 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 HERV-K104P63124 156 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 SRPXP78539 464 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 ARF5P84085 180 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 SLC17A1Q14916 467 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 ECSCRQ19T08 205 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 ZNF772Q68DY9 489 aaPredicted RBP4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 RCHY1Q96PM5 261 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 GAL3ST4Q96RP7 486 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 JPH2Q9BR39 696 aaPredicted RBP4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 CHCHD5Q9BSY4 110 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 OCR1Q9BZK8 76 aa4.15□□□□□ -1.75
HMGCS1-207ENST00000514610 GNB4Q9HAV0 340 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms