RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 CCT5P48643 541 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 PKNOX1P55347 436 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 MLF1P58340 268 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 NAA20P61599 178 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 LCP2Q13094 533 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 BIKQ13323 160 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 TUBA3CQ13748 450 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 DDX39BQ13838 428 aaKnown RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 SERTAD2Q14140 314 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 ELAVL1Q15717 326 aaKnown RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 MEP1AQ16819 746 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 TNFAIP8L3Q5GJ75 292 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 ZNF468Q5VIY5 522 aaPredicted RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 C18orf63Q68DL7 685 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 TUBA3EQ6PEY2 450 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 RPS19BP1Q86WX3 136 aaKnown RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 MYLK4Q86YV6 388 aaPredicted RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 KIF2BQ8N4N8 673 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 CISD2Q8N5K1 135 aaKnown RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 MORN4Q8NDC4 146 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 ARMC2Q8NEN0 867 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 OR6Y1Q8NGX8 325 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 RDH11Q8TC12 318 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 CHTF18Q8WVB6 975 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 UCN3Q969E3 161 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 ATP6V1E2Q96A05 226 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 CCDC126Q96EE4 140 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 SCMH1Q96GD3 660 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 TAAR6Q96RI8 345 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 SLC29A3Q9BZD2 475 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 C12orf65Q9H3J6 166 aaKnown RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 CLMPQ9H6B4 373 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 COPS7BQ9H9Q2 264 aaPredicted RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 KCNK13Q9HB14 408 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 ASF1BQ9NVP2 202 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 OXSMQ9NWU1 459 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 LYARQ9NX58 379 aaKnown RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 LUZP4Q9P127 313 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 TEKT2Q9UIF3 430 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 PLLPQ9Y342 182 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 SPTBN1Q01082 2364 aaKnown RBP9.06□□□□□ -0.96
RNF4-221ENST00000513643 DYTNA2CJ06 578 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 A8MUI8 341 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 NPIPB8E9PQR5 432 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 MANBAO00462 879 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 PRKNO60260 465 aaPredicted RBP9.05□□□□□ -0.96
RNF4-221ENST00000513643 LDB3O75112 727 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 NEURL1O76050 574 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 MYO1DO94832 1006 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 GPR75O95800 540 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 TUBBP07437 444 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 FAM58BPP0C7Q3 252 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 KRT15P19012 456 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 CPN2P22792 545 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 GALNSP34059 522 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 STT3AP46977 705 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 ARG2P78540 354 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 PHEXP78562 749 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 TNFRSF17Q02223 184 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 IFT88Q13099 833 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 SLC13A2Q13183 592 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 INAQ16352 499 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 TCHHL1Q5QJ38 904 aaPredicted RBP9.05□□□□□ -0.96
RNF4-221ENST00000513643 ABHD17BQ5VST6 288 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 FCRLBQ6BAA4 426 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 GALNT18Q6P9A2 607 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 DGAT2L6Q6ZPD8 337 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 FRMD7Q6ZUT3 714 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 GPRIN3Q6ZVF9 776 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 NUDT13Q86X67 352 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 BEST3Q8N1M1 668 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 TMEM132CQ8N3T6 1108 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 SLC5A8Q8N695 610 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 OR1N1Q8NGS0 311 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 OR8K3Q8NH51 312 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 ZNF721Q8TF20 911 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 AGAP11Q8TF27 550 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 FAR1Q8WVX9 515 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 MTFMTQ96DP5 389 aaKnown RBP9.05□□□□□ -0.96
RNF4-221ENST00000513643 SLX1AQ9BQ83 275 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 CENPKQ9BS16 269 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 ILKAPQ9H0C8 392 aaPredicted RBP9.05□□□□□ -0.96
RNF4-221ENST00000513643 RPF2Q9H7B2 306 aaKnown RBP9.05□□□□□ -0.96
RNF4-221ENST00000513643 TNFRSF12AQ9NP84 129 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.05□□□□□ -0.96
RNF4-221ENST00000513643 PHF11Q9UIL8 331 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 FBXW2Q9UKT8 454 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 CES1P1Q9UKY3 287 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 SNX6Q9UNH7 406 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 STK38LQ9Y2H1 464 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 CCL27Q9Y4X3 112 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 COPG1Q9Y678 874 aaKnown RBP9.05□□□□□ -0.96
RNF4-221ENST00000513643 V9GYY5 206 aaPredicted RBP9.05□□□□□ -0.96
RNF4-221ENST00000513643 SVILO95425 2214 aa9.05□□□□□ -0.96
RNF4-221ENST00000513643 UTP20O75691 2785 aaKnown RBP9.04□□□□□ -0.96
RNF4-221ENST00000513643 ASPDHA6ND91 283 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 A8MUA0 341 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 H3BQF6 201 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 COPEO14579 308 aa9.04□□□□□ -0.96
RNF4-221ENST00000513643 PGRMC2O15173 223 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms