RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 CLIC1O00299 241 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 AHSA1O95433 338 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 CEACAM5P06731 702 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 LINGO3P0C6S8 592 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 BCKDHBP21953 392 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 PSMB5P28074 263 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 VHLP40337 213 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 POLE2P56282 527 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 REEP5Q00765 189 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 GPR19Q15760 415 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZNF789Q5FWF6 425 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 OTUD3Q5T2D3 398 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 NDUFAF5Q5TEU4 345 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 LCN1P1Q5VSP4 162 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZCCHC12Q6PEW1 402 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 OPN5Q6U736 354 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 PGAM4Q8N0Y7 254 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 OR10A6Q8NH74 314 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 OR14L1PQ8NHC6 308 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 AGAP11Q8TF27 550 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 TBC1D20Q96BZ9 403 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 GPATCH1Q9BRR8 931 aaKnown RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 EHD1Q9H4M9 534 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 NPIPA1Q9UND3 350 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 MMACHCQ9Y4U1 282 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 MYL12BO14950 172 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZNF749O43361 778 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 RENP00797 406 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 AHCYP23526 432 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 TAS2R38P59533 333 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 DCAF7P61962 342 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 CAMK1Q14012 370 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ZSWIM7Q19AV6 140 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 NAIF1Q69YI7 327 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 GTF2IRD2BQ6EKJ0 949 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 LARP4Q71RC2 724 aaKnown RBP eCLIP4.89□□□□□ -1.631e-8■■□□□ 14
PHF3-210ENST00000509876 GTF2IRD2Q86UP8 949 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 OR2AJ1Q8NGZ0 328 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 NSMCE3Q96MG7 304 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 NSUN5Q96P11 429 aaKnown RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 TBC1D23Q9NUY8 699 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ADAM29Q9UKF5 820 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 ATXN7L1Q9ULK2 861 aaPredicted RBP4.89□□□□□ -1.63
PHF3-210ENST00000509876 WDR45Q9Y484 360 aa4.89□□□□□ -1.63
PHF3-210ENST00000509876 DHRS12A0PJE2 317 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 WASHC1A8K0Z3 465 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 TNFRSF11BO00300 401 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 NUDT21O43809 227 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 CCL11P51671 97 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 CASP9P55211 416 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 KLC1Q07866 573 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 FZD2Q14332 565 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 LASP1Q14847 261 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 C16orf72Q14CZ0 275 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 SYT16Q17RD7 645 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 TMEM215Q68D42 235 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 WASH2PQ6VEQ5 465 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 HSDL2Q6YN16 418 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 EPHX4Q8IUS5 362 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 NLGN4XQ8N0W4 816 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 FBXW8Q8N3Y1 598 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 PDPRQ8NCN5 879 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 RCBTB1Q8NDN9 531 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 NLGN4YQ8NFZ3 816 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 UBTD2Q8WUN7 234 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 GIN1Q9NXP7 522 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 SPHK1Q9NYA1 384 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 BOKQ9UMX3 212 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 SH3GLB1Q9Y371 365 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 TDRD15B5MCY1 1934 aaKnown RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 TRIP12Q14669 1992 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 TMEM233B4DJY2 109 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 HAT1O14929 419 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 GPR39O43194 453 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 CHST10O43529 356 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 PEX1O43933 1283 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 CCNB2O95067 398 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 NPPAP01160 153 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 FCARP24071 287 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 SERPINB10P48595 397 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 GTF2A1P52655 376 aaPredicted RBP4.88□□□□□ -1.63
PHF3-210ENST00000509876 BNIP3Q12983 259 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 PTPRRQ15256 657 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 TLR1Q15399 786 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 EPGNQ6UW88 154 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 RNF130Q86XS8 419 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 TMEM178AQ8NBL3 297 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 BMFQ96LC9 184 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 COL21A1Q96P44 957 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 ERVMER34-1Q9H9K5 563 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 MEAF6Q9HAF1 191 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 STMND1H3BQB6 276 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 HCRTR2O43614 444 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 PGRP06401 933 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 ABOP16442 354 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 IVDP26440 423 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 ANKRD26P1Q6NSI1 321 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 DNM1P34Q6PK57 102 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 CCDC81Q6ZN84 652 aa4.88□□□□□ -1.63
PHF3-210ENST00000509876 SHISA6Q6ZSJ9 500 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms